Wilkinson, Mark Denis mark.wilkinson@upm.es

Predicting microbiomes through a deep latent space

  • García-Jiménez B
  • Muñoz J
  • Cabello S
  • Medina J
  • Wilkinson MD

Bioinformatics (p. 1444-1451) - 15/5/2021

10.1093/bioinformatics/btaa971 Ver en origen

  • ISSN 13674803

Endogenous indole-3-acetamide levels contribute to the crosstalk between auxin and abscisic acid, and trigger plant stress responses in Arabidopsis

  • Perez-Alonso, Marta-Marina
  • Ortiz-Garcia, Paloma
  • Moya-Cuevas, Jose
  • Lehmann, Thomas
  • Sanchez-Parra, Beatriz
  • Bjork, Robert G.
  • Karim, Sazzad
  • Amirjani, Mohammad R.
  • Aronsson, Henrik
  • Wilkinson, Mark D.
  • Pollmann, Stephan;
... Ver más Contraer

Journal Of Experimental Botany (p. 459-475) - 2/2/2021

10.1093/jxb/eraa485 Ver en origen

  • ISSN 00220957

The FAIR Guiding Principles for scientific data management and stewardship (vol 15, 160018, 2016)

  • Wilkinson, Mark D
  • Dumontier, Michel
  • Aalbersberg, Ijsbrand Jan
  • Appleton, Gabrielle
  • Axton, Myles
  • Baak, Arie
  • Blomberg, Niklas
  • Boiten, Jan-Willem
  • Santos, Luiz Bonino da Silva
  • Bourne, Philip E
  • Bouwman, Jildau
  • Brookes, Anthony J
  • Clark, Tim
  • Crosas, Merce
  • Dillo, Ingrid
  • Dumon, Olivier
  • Edmunds, Scott
  • Evelo, Chris T
  • Finkers, Richard
  • Gonzalez-Beltran, Alejandra
  • Gray, Alasdair J G
  • Groth, Paul
  • Goble, Carole
  • Grethe, Jeffrey S
  • Heringa, Jaap
  • Hoen, Peter A C 'T
  • Hooft, Rob
  • Kuhn, Tobias
  • Kok, Ruben
  • Kok, Joost
  • Lusher, Scott J
  • Martone, Maryann E
  • Mons, Albert
  • Packer, Abel L
  • Persson, Bengt
  • Rocca-Serra, Philippe
  • Roos, Marco
  • van Schaik, Rene
  • Sansone, Susanna-Assunta
  • Schultes, Erik
  • Sengstag, Thierry
  • Slater, Ted
  • Strawn, George
  • Swertz, Morris A
  • Thompson, Mark
  • van der Lei, Johan
  • van Mulligen, Erik
  • Velterop, Jan
  • Waagmeester, Andra
  • Wittenburg, Peter
  • Wolstencroft, Katherine
  • Zhao, Jun
  • Mons, Barend
... Ver más Contraer

Scientific Data - 19/3/2019

10.1038/s41597-019-0009-6 Ver en origen

  • ISSN 20524463

Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa

  • Paya-Milans, Miriam
  • Poza-Viejo, Laura
  • San Martin-Uriz, Patxi
  • Lara-Astiaso, David
  • Wilkinson, Mark D
  • Crevillen, Pedro

Gigascience - 6/12/2019

10.1093/gigascience/giz147 Ver en origen

  • ISSN 2047217X

Evaluating FAIR maturity through a scalable, automated, community-governed framework

  • Wilkinson, Mark D
  • Dumontier, Michel
  • Sansone, Susanna-Assunta
  • Santos, Luiz Olavo Bonino Da Silva
  • Prieto, Mario
  • Batista, Dominique
  • McQuilton, Peter
  • Kuhn, Tobias
  • Rocca-Serra, Philippe
  • Crosas, Merce
  • Schultes, Erik
... Ver más Contraer

Scientific Data - 1/12/2019

10.1038/s41597-019-0184-5 Ver en origen

  • ISSN 20524463

Evaluating FAIR maturity through a scalable, automated, community-governed framework (vol 6, 174, 2019)

  • Wilkinson, Mark D
  • Dumontier, Michel
  • Sansone, Susanna-Assunta
  • da Silva Santos, Luiz Olavo Bonino
  • Prieto, Mario
  • Batista, Dominique
  • McQuilton, Peter
  • Kuhn, Tobias
  • Rocca-Serra, Philippe
  • Crosas, Merce
  • Schultes, Erik
... Ver más Contraer

Scientific Data - 1/12/2019

10.1038/s41597-019-0248-6 Ver en origen

  • ISSN 20524463

Virulence- and signaling-associated genes display a preference for long 3 ' UTRs during rice infection and metabolic stress in the rice blast fungus

  • Rodriguez-Romero, Julio
  • Marconi, Marco
  • Ortega-Campayo, Victor
  • Demuez, Marie
  • Wilkinson, Mark D
  • Sesma, Ane

New Phytologist (p. 399-414) - 1/1/2019

10.1111/nph.15405 Ver en origen

  • ISSN 0028646X

Robust and automatic definition of microbiome states

  • Garcia-Jimenez, Beatriz
  • Wilkinson, Mark D

Peerj - 1/1/2019

10.7717/peerj.6657 Ver en origen

  • ISSN 21678359

MDPbiome: microbiome engineering through prescriptive perturbations

  • Garcia-Jimenez, Beatriz
  • de la Rosa, Tomas
  • Wilkinson, Mark D

Bioinformatics (p. 838-847) - 1/9/2018

10.1093/bioinformatics/bty562 Ver en origen

  • ISSN 13674803

MECP2 variation in Rett syndrome-An overview of current coverage of genetic and phenotype data within existing databases

  • Townend, Gillian S
  • Ehrhart, Friederike
  • van Kranen, Henk J
  • Wilkinson, Mark
  • Jacobsen, Annika
  • Roos, Marco
  • Willighagen, Egon L
  • van Enckevort, David
  • Evelo, Chris T
  • Curfs, Leopold M G
... Ver más Contraer

Human Mutation (p. 914-924) - 1/7/2018

10.1002/humu.23542 Ver en origen

  • ISSN 10597794

Este/a investigador/a no tiene libros.

Bioinformatics tools for next-generation RNA sequencing analysis

  • Marconi M
  • Rodriguez-Romero J
  • Sesma A
  • Wilkinson M

Fungal Rna Biology (p. 371-391) - 1/3/2014

10.1007/978-3-319-05687-6_15 Ver en origen

Modeling recovery of Crohn's disease, by simulating microbial community dynamics under perturbations

  • Jorge Carrasco
  • WILKINSON, MARK DENIS
  • Garcia Jimenez, Beatriz

Ismb-Eccb 2019 (p. 36-36) - 21/7/2019

10.13140/rg.2.2.33350.63049 Ver en origen

Condensed Microbiome representation using Transfer and Deep Learning to Promote Microbial Composition Prediction

  • Sara Cabello
  • WILKINSON, MARK DENIS
  • Garcia Jimenez, Beatriz

Advances Incomputational Biology fostering Collaborationamong Women Scientists book Of Abstracts (p. 78-78) - 28/11/2019

  • iMarina

Unraveling Certainty in Bio-Scholarly Statements

  • WILKINSON, MARK DENIS
  • PRIETO GODOY, MARIO

0000-0000 (p. 112-112) - 14/11/2018

  • iMarina

Boosting genotype-phenotype and translational research on rare diseases by establishing Findable, Accessible, Interoperable and Reusable (FAIR) data resources through data linking technologies.

  • WILKINSON, MARK DENIS

Http://Www.Abstractsonline.Com/Plan/Viewabstract.Aspx?Skey=d9a7502e-A4d5-4bde-8329-8e609d95cd6f&ckey=1f9e2b9b-3380-44c6-928d-03e1a9914236&mkey=%7b15a3630e-7769-4d64-A80a-47f190ac2f4f%7d (p. 0-0) - 27/5/2017

  • iMarina

Bring Your Own Data workshop is an excellent tool to promote the establishment of Findable, Accessible, Interoperable, and Reusable rare disease registries

  • WILKINSON, MARK DENIS

Http://Www.Abstractsonline.Com/Plan/Viewabstract.Aspx?Skey=23903b09-5750-4359-Ad3a-157d48dc9c04&ckey=2e3c9531-7a52-437d-Aff1-Fb6a8dcead6b&mkey=%7b15a3630e-7769-4d64-A80a-47f190ac2f4f%7d (p. 0-0) - 27/5/2017

  • iMarina

Boosting health care and life science research on rare diseases by creating a robust infrastructure of independently Findable, Accessible, Interoperable, and Reusable (FAIR) biobanks, registries, and molecular data resources

  • WILKINSON, MARK DENIS

Http://Irdirc-Conference.Org/Wp-Content/Uploads/2017/02/Irdirc-2017_Conference-Book_Final.Pdf (p. 28-28) - 8/2/2017

  • iMarina

The FAIRification of Data and the Potential of FAIR Resources Demonstrated, in Practice, at the Rome Bring Your Own Data Workshop

  • WILKINSON, MARK DENIS

Ceur Workshop Proceedings (p. 0-0) - 4/12/2017

  • ISSN 16130073
  • iMarina

Overview of a suite of middle-ware services for implementing FAIR data principles

  • WILKINSON, MARK DENIS

Proceedings Of Swat4hcls 2017 (p. 0-0) - 4/12/2017

  • ISSN 16130073
  • iMarina

The FAIRification of data and the potentialities of FAIR resources showed, in practice, at the Rome ?Bring Your Own Data? workshop

  • WILKINSON, MARK DENIS

Proceedings Of Swat4hcls 2017 (p. 0-0) - 4/12/2017

  • iMarina

Alternative polyadenylation regulates plant development and response to stress

  • WILKINSON, MARK DENIS
  • Marconi, Marco
  • MANZANO FERNANDEZ, CONCEPCION
  • NAVARRO NEILA, SARA
  • Téllez Robledo, Bárbara
  • DEL POZO BENITO, JUAN CARLOS

Libro De Abstracts (p. 0-0) - 22/6/2016

  • iMarina

Este/a investigador/a no tiene documentos de trabajo.

Este/a investigador/a no tiene informes técnicos.

COLABORACIÓN EN LA IMPLEMENTACIÓN DE TECHNOLOGÍAS FAIR, INCLUSIVO UNA PLATAFORMA PILOTO DE FAIR EN EL CENTRO CBGP

  • WILKINSON, MARK DENIS

Ejecución: 02-01-2020 - 01-01-2021

Tipo: Interno

  • iMarina

PERFORM TRAINING MODULES ON FAIR DATA STEWARDSHIP COUSES BY PHORTOS

  • WILKINSON, MARK DENIS

Ejecución: 25-05-2019 - 25-06-2019

Tipo: Interno

  • iMarina

PERFORM TRAINING MODULES ON FAIR DATA STEWARDSHIP COURSES OFFERED BY PHORTOS

  • WILKINSON, MARK DENIS

Ejecución: 08-10-2019 - 08-11-2019

Tipo: Interno

  • iMarina

European Joint Programme on Rare Diseases

  • PRIETO GODOY, MARIO (Participante)
  • WILKINSON, MARK DENIS (Participante)

Ejecución: 01-01-2019 - 31-12-2023

Tipo: Internacional

Importe financiado: 341571,13 Euros.

  • iMarina

Aclaración de los mecanismos moleculares conectando el nudo AMI1 con el equilibrio entre crecimiento y defensa

  • WILKINSON, MARK DENIS
  • POLLMANN, STEPHAN

Ejecución: 01-01-2018 - 30-09-2021

Tipo: Nacional

Importe financiado: 96800,00 Euros.

  • iMarina

Nuevas fronteras de la biología de plantas

  • GARCIA-ARENAL RODRIGUEZ, FERNANDO

Ejecución: 01-01-2015 - 31-12-2016

Tipo: Nacional

Importe financiado: 9000,00 Euros.

  • iMarina

Calidad y Confianza de Procedencia en e-Ciencia

  • WILKINSON, MARK DENIS

Ejecución: 01-01-2015 - 31-10-2018

Tipo: Nacional

Importe financiado: 59411,00 Euros.

  • iMarina

Workshop "New Frontiers in Plant Biology"

  • GARCIA-ARENAL RODRIGUEZ, FERNANDO

Ejecución: 13-09-2012 - 30-09-2013

Tipo: Nacional

Importe financiado: 4000,00 Euros.

  • iMarina

Bioinformatic approaches to understand RNA biology in the rice blast fungus

  • WILKINSON, MARK DENIS (Supervisor)

1/1/2017

  • iMarina

FAIR approaches applied to unraveling Plant-Pathogen Interactions Data and RNA Processing Evolution

  • WILKINSON, MARK DENIS (Supervisor)

1/9/2016

  • iMarina

Este/a investigador/a no tiene patentes o licencias de software.

Última actualización de los datos: 17/04/22 21:41