Garcia Jimenez, Beatriz beatriz.garcia@upm.es

Predicting microbiomes through a deep latent space

  • García-Jiménez B
  • Muñoz J
  • Cabello S
  • Medina J
  • Wilkinson MD

Bioinformatics (p. 1444-1451) - 15/5/2021

10.1093/bioinformatics/btaa971 Ver en origen

  • ISSN 13674803

Metabolic modelling approaches for describing and engineering microbial communities

  • García-Jiménez B
  • Torres-Bacete J
  • Nogales J

Computational And Structural Biotechnology Journal (p. 226-246) - 1/1/2021

10.1016/j.csbj.2020.12.003 Ver en origen

  • ISSN 20010370

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing (Nature Biotechnology, (2020), 38, 3, (272-276), 10.1038/s41587-020-0446-y)

  • Lieven C
  • Beber ME
  • Olivier BG
  • Bergmann FT
  • Ataman M
  • Babaei P
  • Bartell JA
  • Blank LM
  • Chauhan S
  • Correia K
  • Diener C
  • Dräger A
  • Ebert BE
  • Edirisinghe JN
  • Faria JP
  • Feist AM
  • Fengos G
  • Fleming RMT
  • García-Jiménez B
  • Hatzimanikatis V
  • van Helvoirt W
  • Henry CS
  • Hermjakob H
  • Herrgård MJ
  • Kaafarani A
  • Kim HU
  • King Z
  • Klamt S
  • Klipp E
  • Koehorst JJ
  • König M
  • Lakshmanan M
  • Lee DY
  • Lee SY
  • Lee S
  • Lewis NE
  • Liu F
  • Ma H
  • Machado D
  • Mahadevan R
... Ver más Contraer

Nature Biotechnology (p. 504-504) - 1/4/2020

10.1038/s41587-020-0477-4 Ver en origen

  • ISSN 10870156

MEMOTE for standardized genome-scale metabolic model testing

  • Lieven, Christian
  • Beber, Moritz E
  • Olivier, Brett G
  • Bergmann, Frank T
  • Ataman, Meric
  • Babaei, Parizad
  • Bartell, Jennifer A
  • Blank, Lars M
  • Chauhan, Siddharth
  • Correia, Kevin
  • Diener, Christian
  • Draeger, Andreas
  • Ebert, Birgitta E
  • Edirisinghe, Janaka N
  • Faria, Jose P
  • Feist, Adam M
  • Fengos, Georgios
  • Fleming, Ronan M T
  • Garcia-Jimenez, Beatriz
  • Hatzimanikatis, Vassily
  • van Helvoirt, Wout
  • Henry, Christopher S
  • Hermjakob, Henning
  • Herrgard, Markus J
  • Kaafarani, Ali
  • Kim, Hyun Uk
  • King, Zachary
  • Klamt, Steffen
  • Klipp, Edda
  • Koehorst, Jasper J
  • Koenig, Matthias
  • Lakshmanan, Meiyappan
  • Lee, Dong-Yup
  • Lee, Sang Yup
  • Lee, Sunjae
  • Lewis, Nathan E
  • Liu, Filipe
  • Ma, Hongwu
  • Machado, Daniel
  • Mahadevan, Radhakrishnan
  • Maia, Paulo
  • Mardinoglu, Adil
  • Medlock, Gregory L
  • Monk, Jonathan M
  • Nielsen, Jens
  • Nielsen, Lars Keld
  • Nogales, Juan
  • Nookaew, Intawat
  • Palsson, Bernhard O
  • Papin, Jason A
  • Patil, Kiran R
  • Poolman, Mark
  • Price, Nathan D
  • Resendis-Antonio, Osbaldo
  • Richelle, Anne
  • Rocha, Isabel
  • Sanchez, Benjamin J
  • Schaap, Peter J
  • Sheriff, Rahuman S Malik
  • Shoaie, Saeed
  • Sonnenschein, Nikolaus
  • Teusink, Bas
  • Vilaca, Paulo
  • Vik, Jon Olav
  • Wodke, Judith A H
  • Xavier, Joana C
  • Yuan, Qianqian
  • Zakhartsev, Maksim
  • Zhang, Cheng
... Ver más Contraer

Nature Biotechnology (p. 272-276) - 1/3/2020

10.1038/s41587-020-0446-y Ver en origen

  • ISSN 10870156

Data-driven classification of the certainty of scholarly assertions

  • Prieto, Mario
  • Deus, Helena
  • de Waard, Anita
  • Schultes, Erik
  • Garcia-Jimenez, Beatriz
  • Wilkinson, Mark D

Peerj - 1/1/2020

10.7717/peerj.8871 Ver en origen

  • ISSN 21678359

Robust and automatic definition of microbiome states

  • Garcia-Jimenez, Beatriz
  • Wilkinson, Mark D

Peerj - 1/1/2019

10.7717/peerj.6657 Ver en origen

  • ISSN 21678359

MDPbiome: microbiome engineering through prescriptive perturbations

  • Garcia-Jimenez, Beatriz
  • de la Rosa, Tomas
  • Wilkinson, Mark D

Bioinformatics (p. 838-847) - 1/9/2018

10.1093/bioinformatics/bty562 Ver en origen

  • ISSN 13674803

Predicting Protein Relationships to Human Pathways through a Relational Learning Approach Based on Simple Sequence Features

  • Garcia Jimenez, Beatriz
  • Pons, Tirso
  • Sanchis De Miguel, Maria Araceli
  • Valencia, Alfonso

IEEE-ACM Transactions on Computational Biology and Bioinformatics (p. 753-765) - 1/8/2014

https://doi.org/10.1109/tcbb.2014.2318730 Ver en origen

  • EISSN 1557-9964
  • ISSN 15455963

Inference of Functional Relations in Predicted Protein Networks with a Machine Learning Approach

  • Garcia-Jimenez, Beatriz
  • Juan, David
  • Ezkurdia, Iakes
  • Andres-Leon, Eduardo
  • Valencia, Alfonso;

Plos One - 1/1/2010

10.1371/journal.pone.0009969 Ver en origen

  • ISSN 19326203

EcID. A database for the inference of functional interactions in E. coli

  • Andres Leon, Eduardo
  • Ezkurdia, Iakes
  • Garcia, Beatriz
  • Valencia, Alfonso
  • Juan, David;

Nucleic Acids Research (p. D629-D635) - 1/1/2009

10.1093/nar/gkn853 Ver en origen

  • ISSN 03051048

Este/a investigador/a no tiene libros.

Este/a investigador/a no tiene capítulos de libro.

Modeling recovery of Crohn's disease, by simulating microbial community dynamics under perturbations

  • Jorge Carrasco
  • WILKINSON, MARK DENIS
  • Garcia Jimenez, Beatriz

Ismb-Eccb 2019 (p. 36-36) - 21/7/2019

10.13140/rg.2.2.33350.63049 Ver en origen

Condensed Microbiome representation using Transfer and Deep Learning to Promote Microbial Composition Prediction

  • Sara Cabello
  • WILKINSON, MARK DENIS
  • Garcia Jimenez, Beatriz

Advances Incomputational Biology fostering Collaborationamong Women Scientists book Of Abstracts (p. 78-78) - 28/11/2019

  • iMarina

FLYCOP: Metabolic modeling-based analysis and engineering microbial communities

  • García-Jiménez B
  • García JL
  • Nogales J

Bioinformatics (p. i954-i963) - 1/9/2018

10.1093/bioinformatics/bty561 Ver en origen

  • ISSN 13674803

Automatic Annotation of Bioinformatics Workflows with Biomedical Ontologies

  • Garcia-Jimenez, Beatriz
  • Wilkinson, Mark D

Lecture Notes In Computer Science (p. 464-478) - 1/1/2014

  • ISSN 03029743
  • iMarina

MMRF for Proteome Annotation Applied to Human Protein Disease Prediction

  • Garcia-Jimenez, Beatriz
  • Ledezma, Agapito
  • Sanchis, Araceli;

Lecture Notes In Computer Science (p. 67-75) - 1/1/2011

  • ISSN 03029743
  • iMarina

S.cerevisiae Complex Function Prediction with Modular Multi-Relational Framework

  • Garcia Jimenez, Beatriz
  • Ledezma, Agapito
  • Sanchis, Araceli;

Lecture Notes In Computer Science (p. 82-91) - 1/1/2010

  • ISSN 03029743
  • iMarina

Genetic Programming for Predicting Protein Networks

  • Garcia Jimenez, Beatriz
  • Aler Mur, Ricardo
  • Ledezma Espino, Agapito Ismael
  • Sanchis De Miguel, Maria Araceli

11th Ibero-American Conference on Artificial Intelligence, IBERAMIA 2008 (p. 432-441) - 1/1/2008

Editor: SPRINGER

  • ISBN 978-3-540-88308-1
  • ISSN 03029743

Studying the capacity of grammatical encoding to generate FNN architectures

  • Gutierrez, G
  • Garcia, B
  • Molina, JM
  • Sanchis, A;

Lecture Notes In Computer Science (p. 478-485) - 1/1/2003

  • ISSN 03029743
  • iMarina

Este/a investigador/a no tiene documentos de trabajo.

Este/a investigador/a no tiene informes técnicos.

Este/a investigador/a no tiene proyectos de investigación.

Este/a investigador/a no tiene tesis dirigidas.

Este/a investigador/a no tiene patentes o licencias de software.

Última actualización de los datos: 22/01/22 8:07