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Author profile at the institutional portal

Rodriguez-paton Aradas, Alfonso Vicente alfonso.rodriguez-paton@upm.es

INTELIGENCIA ARTIFICIAL / Universidad Politécnica de Madrid

Publications

A Parallel Workflow Pattern Modeling Using Spiking Neural P Systems With Colored Spikes

  • Song, Tao
  • Zeng, Xiangxiang
  • Zheng, Pan
  • Jiang, Min
  • Rodriguez-Paton, Alfonso;

Ieee Transactions On Nanobioscience (p. 474-484) - 1/10/2018

10.1109/tnb.2018.2873221 View at source

  • ISSN 15361241

A Parallel Bioinspired Framework for Numerical Calculations Using Enzymatic P System With an Enzymatic Environment

  • Pang, Shanchen
  • Ding, Tong
  • Rodriguez-Paton, Alfonso
  • Song, Tao
  • Zheng, Pan;

Ieee Access (p. 65548-65556) - 1/1/2018

10.1109/access.2018.2876364 View at source

  • ISSN 21693536

Directed evolution of biocircuits using conjugative plasmids and CRISPR-Cas9: design and in silico experiments

  • Benes, David
  • Rodriguez-Paton, Alfonso
  • Sosik, Petr;

Natural Computing (p. 497-505) - 1/9/2017

10.1007/s11047-016-9595-9 View at source

  • ISSN 15677818

A New Improved and Extended Version of the Multicell Bacterial Simulator gro

  • Gutierrez, Martin
  • Gregorio-Godoy, Paula
  • Perez del Pulgar, Guillermo
  • Munoz, Luis E.
  • Saez, Sandra
  • Rodriguez-Paton, Alfonso;

Acs Synthetic Biology (p. 1496-1508) - 18/8/2017

10.1021/acssynbio.7b00003 View at source

  • ISSN 21615063

BioBlocks: Programming Protocols in Biology Made Easier

  • Gupta, Vishal
  • Irimia, Jesus
  • Pau, Ivan
  • Rodriguez-Paton, Alfonso;

Acs Synthetic Biology (p. 1230-1232) - 21/7/2017

10.1021/acssynbio.6b00304 View at source

  • ISSN 21615063

Highly Biocompatible Drug-Delivery Systems Based on DNA Nanotechnology

  • Li, Xin
  • Hong, Li
  • Song, Tao
  • Rodriguez-Paton, Alfonso
  • Chen, Congzhou
  • Zhao, Haiyan
  • Shi, Xiaolong;
... View more Collapse

Journal Of Biomedical Nanotechnology (p. 747-757) - 1/7/2017

10.1166/jbn.2017.2383 View at source

  • ISSN 15507033

Probability-based collaborative filtering model for predicting gene-disease associations

  • Zeng, Xiangxiang
  • Ding, Ningxiang
  • Rodriguez-Paton, Alfonso
  • Zou, Quan;

Bmc Medical Genomics - 28/12/2017

10.1186/s12920-017-0313-y View at source

  • ISSN 17558794

Theory and Application of Bio-inspired Intelligence and Methods J.UCS Special Issue

  • Zhang, Xingyi
  • Rodriguez-Paton Aradas, Alfonso
  • Zeng, Xiangxiang
  • Song, Tao
  • Zheng, Pan;

Journal Of Universal Computer Science (p. 586-588) - 1/1/2017

  • ISSN 0948695X
  • iMarina

P Systems Simulating Bacterial Conjugation: Universality and Properties

  • Paun, Andrei
  • Rodriguez-Paton, Alfonso;

Fundamenta Informaticae (p. 87-103) - 1/1/2017

10.3233/fi-2017-1532 View at source

  • ISSN 01692968

Prediction of MicroRNA-disease Associations by Matrix Completion

  • Zeng, Xiangxiang
  • Ding, Ningxiang
  • Rodriguez-Paton, Alfonso
  • Lin, Ziyu
  • Ju, Ying;

Current Proteomics (p. 151-157) - 1/6/2016

10.2174/157016461302160514005711 View at source

  • ISSN 15701646

This researcher has no books.

An implementation of elementary arithmetic with virus machine

  • Xiaoshan Yan
  • Xiangrong Liu
  • Xiangxiang Zeng
  • Alfonso Rodríquez Patón

Lecture Notes In Computer Science (p. 304-317) - 1/1/2018

10.1007/978-3-030-00265-7_24 View at source

  • ISSN 03029743

On Complexity Classes of Spiking Neural P Systems

  • Alfonso Rodríguez-Patón Aradas
  • Petr Sosík
  • Ludek Cienciala

Eighth Brainstorming Week On Membrane Computing (p. 267-282) - 1/1/2010

  • iMarina

Standardized Proofs of PSPACE-completeness of P Systems with Active Membranes

  • Petr Sosík
  • Alfonso Rodríguez-Patón Aradas
  • Lucie Ciencialová

Eighth Brainstorming Week On Membrane Computing (p. 301-310) - 1/1/2010

  • iMarina

Biomolecular computing devices in synthetic biology

  • Miró J
  • Rodríguez-Patón A

Advancing Artificial Intelligence Through Biological Process Applications (p. 250-267) - 1/12/2008

10.4018/978-1-59904-996-0.ch014 View at source

Self-adapting intelligent neural systems using evolutionary techniques

  • Manrique D
  • Ríos J
  • Rodríguez-Patón A

Artificial Neural Networks In Real-Life Applications (p. 94-115) - 1/12/2005

10.4018/978-1-59140-902-1.ch005 View at source

LncRNA-disease association prediction based on neighborhood information aggregation in neural network

  • Chen H
  • Wang X
  • Zhang X
  • Zeng X
  • Song T
  • Rodriguez-Paton A

Proceedings - 2018 Ieee International Conference On Bioinformatics And Biomedicine, Bibm 2018 (p. 175-178) - 21/1/2019

10.1109/bibm.2018.8621441 View at source

  • ISSN 21561133

An auxin hormone - signaling factors oscillator regulates time-dependent branching in the Arabidopsis root

  • Marcos Rodriguez
  • Juan Perianez-Rodriguez
  • Juan Carlos del Pozo
  • Angela Saez
  • SANCHEZ CORRIONERO, ALVARO
  • BUSTILLO AVENDAÑO, ESTEFANO
  • MORENO RISUEÑO, MIGUEL ANGEL
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE
... View more Collapse

Libro De Resumenes Del Xv Simposio De Fitohormonas De La Sociedad Española De Fisiología Vegetal (p. 28-28) - 13/12/2018

  • iMarina

Iteratively collective prediction of disease-gene associations through the incomplete network

  • Meng, Xiangyi
  • Zou, Quan
  • Rodriguez-Paton, Alfonso
  • Zeng, Xiangxiang;

Proceedings - 2017 Ieee International Conference On Bioinformatics And Biomedicine, Bibm 2017 (p. 1324-1330) - 15/12/2017

10.1109/bibm.2017.8217854 View at source

Simulating multicell populations with an accelerated gro simulator

  • Gutierrez, Martin
  • Rodriguez-Paton, Alfonso;

Fourteenth European Conference On Artificial Life (Ecal 2017) (p. 186-187) - 1/1/2017

  • iMarina

BioBlocks :A web-based visual environment for programming experimental protocols in biological sciences

  • Jesus Irimia
  • Gupta, Vishal
  • PAU DE LA CRUZ, IVAN
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE

Proceedings Of The 8th International Workshop On Bio-Design Automation (p. 29-30) - 16/8/2016

  • iMarina

BactoSim - An Individual-Based Simulation Environment for Bacterial Conjugation

  • Prestes Garcia, Antonio
  • Rodriguez-Paton, Alfonso;

Bactosim ? An Individual-Based Simulation Environment For Bacterial Conjugation (p. 275-279) - 3/6/2015

10.1007/978-3-319-18944-4_26 View at source

  • ISSN 03029743

A Preliminary Assessment of Three Strategies for the Agent-Based Modeling of Bacterial Conjugation

  • García A
  • Rodríguez-Patón A

A Preliminary Assessment Of Three Strategies For The Agent-Based Modeling Of Bacterial Conjugation (p. 1-9) - 19/5/2015

10.1007/978-3-319-19776-0_1 View at source

  • ISSN 21945357

Probabilistic reasoning with an enzyme-driven DNA device

  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE

Lecture Notes In Computer Science (p. 160-173) - 2/12/2013

10.1007/978-3-319-01928-4_12 View at source

  • ISSN 03029743

Distributed computing with prokaryotic immune systems

  • Murphy N
  • Rodríguez-Patón A

Lecture Notes In Computer Science (p. 286-288) - 24/9/2012

10.1007/978-3-642-33757-4_22 View at source

  • ISSN 03029743

One-gene oscillators with a positive transcriptional feedback and a negative interaction

  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE

Engeneious Conference 2012 (p. 31-31) - 25/6/2012

  • iMarina

This researcher has no working papers.

This researcher has no technical reports.

Descifrando las infecciones bacterianas con técnicas de inteligencia artificial e ingeniería de biocircuitos

  • LOPEZ-MAROTO QUIÑONES, ALVARO (Miembro del equipo de trabajo)
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
  • NUÑEZ BERRUECO, ELENA (Miembro del equipo de trabajo)
  • Mitrana, Victor (Participante)
  • SONG, TAO (Miembro del equipo de trabajo)
  • BARREIRO SORRIVAS, JOSE MARIA (Participante)
  • LEON PRIETO, LUCIA (Miembro del equipo de trabajo)
  • MANRIQUE GAMO, DANIEL (Participante)
... View more Collapse

Period: 01-09-2023 - 31-08-2026

Type of funding: National

  • iMarina

Placing the T3SS effector-network paradigm within a systems level understanding of in vivo infection

  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))

Period: 02-05-2022 - 01-05-2027

Type of funding: International

  • iMarina

APLICACIÓN DE TÉCNICAS DE INTELIGENCIA ARTIFICIAL Y DE APRENDIZAJE AUTOMÁTICO PARA EL ANÁLISIS DE DATOS DE LA EMPRESA NEO SOLUCIONES INFORMÁTICAS SL

  • GARCIA CUESTA, ESTEBAN (Colaborador/a)
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))

Period: 06-04-2022 - 24-07-2022

Type of funding: Internal

  • iMarina

Ultrasensitive BIOsensing platform for multiplex CELLular protein PHEnotyping at single-cell level

  • LEON PRIETO, LUCIA (Participante)
  • MANRIQUE GAMO, DANIEL (Participante)
  • MÉNDEZ MERINO, DAVID (Participante)
  • BARREIRO SORRIVAS, JOSE MARIA (Participante)
  • González Martínez, Ángel Lucas (Participante)
  • Fuertes Castro, José Luis (Participante)
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
... View more Collapse

Period: 01-04-2021 - 31-03-2025

Type of funding: International

Amount of funding: 303250,00 Euros.

  • iMarina

Hacia la Inteligencia Artificial in vivo: programación de fármacos multicelulares vivos inteligentes

  • LOPEZ-MAROTO QUIÑONES, ALVARO (Miembro del equipo de trabajo)
  • SONG, TAO (Miembro del equipo de trabajo)
  • MÉNDEZ MERINO, DAVID (Miembro del equipo de trabajo)
  • Zeng NA, Xiangxiang (Miembro del equipo de trabajo)
  • RODRIGUEZ REGUEIRA, MARCOS (Miembro del equipo de trabajo)
  • SONG, TAO (Participante)
  • NUÑEZ BERRUECO, ELENA (Miembro del equipo de trabajo)
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
  • Fuertes Castro, José Luis (Participante)
  • PAUN, PAUL ANDREI (Participante)
  • MANRIQUE GAMO, DANIEL (Participante)
  • BARREIRO SORRIVAS, JOSE MARIA (Participante)
  • Mitrana, Victor (Participante)
... View more Collapse

Period: 01-06-2020 - 31-05-2023

Type of funding: National

Amount of funding: 87120,00 Euros.

  • iMarina

PROgramable living drugs engineering MIcrobial CELLS

  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))

Period: 01-06-2019 - 31-05-2021

Type of funding: National

Amount of funding: 24700,00 Euros.

  • iMarina

LIA. Ingeniería microbiana, salud y calidad de vida.

  • MÉNDEZ MERINO, DAVID (Participante)
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
  • SONG, TAO (Participante)
  • RODRIGUEZ REGUEIRA, MARCOS (Participante)
  • NUÑEZ BERRUECO, ELENA (Participante)
  • ZENG, XIANGXIANG (Participante)

Period: 01-01-2018 - 30-06-2022

Type of funding: Regional

Amount of funding: 29881,60 Euros.

  • iMarina

PROGRAMMABLE BIOLOGICAL MACHINES

  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))

Period: 01-09-2017 - 31-12-2020

Type of funding: National

Amount of funding: 24642,00 Euros.

  • iMarina

Ingeniería de biocircuitos programables para computación analógica, multicelular y espacial

  • MÉNDEZ MERINO, DAVID (Miembro del equipo de trabajo)
  • HECTOR NIETO, MARIA ELENA (Miembro del equipo de trabajo)
  • MARTINEZ CASTELLANO, EDUARDO (Miembro del equipo de trabajo)
  • RODRIGUEZ REGUEIRA, MARCOS (Miembro del equipo de trabajo)
  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
  • MANRIQUE GAMO, DANIEL (Participante)
  • PAUN, PAUL ANDREI (Participante)
  • BARREIRO SORRIVAS, JOSE MARIA (Participante)
  • GAGO GARCIA, ESTHER (Participante)
  • PAU DE LA CRUZ, IVAN (Participante)
... View more Collapse

Period: 30-12-2016 - 29-12-2020

Type of funding: National

Amount of funding: 90387,00 Euros.

  • iMarina

EVOlutionary PROgrammable antiBIOTICS

  • RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))

Period: 01-03-2014 - 28-02-2017

Type of funding: National

Amount of funding: 20862,00 Euros.

  • iMarina

Modelado computacional de la autoorganización espacial generada por circuitos genéticos multicelulares

  • Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Rodríguez Regueira, Marcos

1/1/2021

  • iMarina

Modelling bacterial ecological strategies using an individual-based simulator

  • Rodríguez-Patón Aradas, Alfonso (Director)
  • PAZOS SIERRA, Juan (Director) Doctorando: Gregorio Godoy, Paula

1/1/2018

  • iMarina

Conditional plasmid conjugation as wiring for multicellular biocircuits: individual-based modeling and simulation

  • Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Guillermo Pérez del Pulgar Frowein

1/1/2017

  • iMarina

An end-to-end solution for automation of biological protocols

  • Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Gupta, Vishal

1/1/2017

  • iMarina

Modeling and analyzing the kinetic of conjugative plasmids

  • Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Prestes García, Antonio

1/1/2017

  • iMarina

A new agent-based platform for simulating multicellular biocircuits with conjugative plasmids

  • Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Gutiérrez Pescarmona, Martín Eduardo

1/1/2017

  • iMarina

Computación celular con membranas: un estudio de modelos de cómputo bioinspirados

  • Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Pérez Pérez, David

1/1/2016

  • iMarina

Inference Models in DNA Computing

  • Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Iñaki Sainz de Murieta Fuentes

1/1/2013

  • iMarina

Oscillatory genetic circuits: new designs and mathematical models

  • Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Jesús María Miró Bueno

1/1/2012

  • iMarina

La Conciencia: Modelado de sus funciones cognitivas para entidades artificiales mediante redes neuronales modulares

  • Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: MARTINEZ LUACES, Milton

1/1/2009

  • iMarina

This researcher has no patents or software licenses.

Last data update: 3/19/24 12:53 AM