Rodriguez-paton Aradas, Alfonso Vicente alfonso.rodriguez-paton@upm.es
Publications
- Articles 75
- Books 0
- Book chapters 5
- Conferences 39
- Working papers 0
- Technical reports 0
- Research projects 16
- Supervised theses 12
- Patent or software license 0
DNMG: Deep molecular generative model by fusion of 3D information for de novo drug design
Methods (p. 10-22) - 1/3/2023
10.1016/j.ymeth.2023.02.001 View at source
- ISSN 10462023
BioBlocksLab: A portable DIY Bio Lab using BioBlocks language
- Ma, TM
- Méndez-Merino, D
- Uría-Regojo, G
- Sánchez-Fernández, C
- Giner-Sánchez, L
- Guerrero-Aspizua, S
- Quílez-López, C
- Rodríguez-Patón, A
Methods (p. 36-43) - 1/2/2023
10.1016/j.ymeth.2023.01.001 View at source
- ISSN 10462023
Will data analytics revolution finally bring SERS to the clinic?
- Mahmoud, AYF
- Teixeira, A
- Aranda, M
- Relvas, MS
- Quintero, S
- Sousa-Silva, M
- Chícharo, A
- Chen, MK
- Hashemi, M
- King, JB
- Tunnell, JW
- Morasso, C
- Piccotti, F
- Corsi, F
- Henriksen-Lacey, M
- Aberasturi, DJD
- Méndez-Merino, D
- Rodríguez-Patón, A
- Abalde-Cela, S
- Diéguez, L
Trac-Trends In Analytical Chemistry - 1/12/2023
10.1016/j.trac.2023.117311 View at source
- ISSN 01659936
PETrans: De Novo Drug Design with Protein-Specific Encoding Based on Transfer Learning
International Journal Of Molecular Sciences - 1/1/2023
10.3390/ijms24021146 View at source
- ISSN 14220067
Molormer: a lightweight self-attention-based method focused on spatial structure of molecular graph for drug-drug interactions prediction
Briefings In Bioinformatics - 19/7/2022
10.1093/bib/bbac296 View at source
- ISSN 14675463
KG-DTI: a knowledge graph based deep learning method for drug-target interaction predictions and Alzheimer's disease drug repositions
- Wang, Shudong
- Du, Zhenzhen
- Ding, Mao
- Rodriguez-Paton, Alfonso
- Song, Tao;
Applied Intelligence (p. 846-857) - 1/1/2022
10.1007/s10489-021-02454-8 View at source
- ISSN 0924669X
Network-Based Approaches for Drug Repositioning
- Song, T
- Wang, G
- Ding, M
- Rodriguez-Paton, A
- Wang, X
- Wang, SD
Molecular Informatics - 1/1/2022
10.1002/minf.202100200 View at source
- ISSN 18681743
AMDE: a novel attention-mechanism-based multidimensional feature encoder for drug-drug interaction prediction
- Pang S
- Zhang Y
- Song T
- Zhang X
- Wang X
- Rodriguez-Patón A
Briefings In Bioinformatics - 1/1/2022
10.1093/bib/bbab545 View at source
- ISSN 14675463
DeepFusion: A deep learning based multi-scale feature fusion method for predicting drug-target interactions
- Song T
- Zhang X
- Ding M
- Rodriguez-Paton A
- Wang S
- Wang G
Methods (p. 269-277) - 1/1/2022
10.1016/j.ymeth.2022.02.007 View at source
- ISSN 10462023
Bolaform Surfactant-Induced Au Nanoparticle Assemblies for Reliable Solution-Based Surface-Enhanced Raman Scattering Detection
- Garcia-Lojo, Daniel
- Mendez-Merino, David
- Perez-Juste, Ignacio
- Acuna, Angel
- Garcia-Rio, Luis
- Rodriguez-Paton, Alfonso
- Pastoriza-Santos, Isabel
- Perez-Juste, Jorge;
Advanced Materials Technologies - 1/1/2022
10.1002/admt.202101726 View at source
- ISSN 2365709X
This researcher has no books.
An implementation of elementary arithmetic with virus machine
- Xiaoshan Yan
- Xiangrong Liu
- Xiangxiang Zeng
- Alfonso Rodríquez Patón
Lecture Notes In Computer Science (p. 304-317) - 1/1/2018
10.1007/978-3-030-00265-7_24 View at source
- ISSN 03029743
- iMarina
- iMarina
On Complexity Classes of Spiking Neural P Systems
- Alfonso Rodríguez-Patón Aradas
- Petr Sosík
- Ludek Cienciala
Eighth Brainstorming Week On Membrane Computing (p. 267-282) - 1/1/2010
- iMarina
Standardized Proofs of PSPACE-completeness of P Systems with Active Membranes
- Petr Sosík
- Alfonso Rodríguez-Patón Aradas
- Lucie Ciencialová
Eighth Brainstorming Week On Membrane Computing (p. 301-310) - 1/1/2010
- iMarina
Biomolecular computing devices in synthetic biology
- Miró J
- Rodríguez-Patón A
Advancing Artificial Intelligence Through Biological Process Applications (p. 250-267) - 1/12/2008
Self-adapting intelligent neural systems using evolutionary techniques
- Manrique D
- Ríos J
- Rodríguez-Patón A
Artificial Neural Networks In Real-Life Applications (p. 94-115) - 1/12/2005
Towards a robust biocomputing solution of intractable problems
- Marc García-Arnau
- Sosik, Petr
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE
- MANRIQUE GAMO, DANIEL
Lecture Notes In Computer Science (p. 221-230) - 27/8/2008
10.1007/978-3-540-77962-9_23 View at source
- ISSN 03029743
- iMarina
- iMarina
Hopcroft’s Minimization Technique: Queues or Stacks?
- un
- Mihaela Pă
- PAUN, PAUL ANDREI
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE
Hopcroft’S Minimization Technique: Queues Or Stacks? (p. 78-91) - 21/7/2008
Self-consciousness for artificial entities using Modular Neural Networks
- Martinez Luaces, Milton
- Gayoso Rocha, Celina
- Pazos Sierra, Juan
- Rodriguez Paton, Alfonso;
Proceedings Of The 9th Wseas International Conference On Neural Networks (Nn' 08) (p. 113-118) - 1/1/2008
- iMarina
Hopcroft's minimization technique: Queues or stacks?
- Pǎun A
- Pǎun M
- Rodríguez-Patón A
Lecture Notes In Computer Science (p. 78-91) - 1/1/2008
10.1007/978-3-540-70844-5_9 View at source
- ISSN 03029743
On Flip-Flop Membrane Systems with Proteins
- Andrei Paun
- Alfonso Rodríguez-Patón Aradas
Lecture Notes In Computer Science (p. 414-427) - 25/6/2007
- ISSN 03029743
- iMarina
A Parallel DNA Algorithm Using a Microfluidic Device to Build Scheduling Grids
- García-Arnau M
- Manrique D
- Rodríguez-Patón A
Lecture Notes In Computer Science (p. 193-202) - 18/6/2007
- ISSN 03029743
- iMarina
Normal forms for spiking neural P systems
- Óscar H Ibarra
- Andrei Paun
- Gheorge Paun
- Alfonso Rodríguez-Patón Aradas
- Petr Sosík
- Sara Woodworth
Theoretical Computer Science (p. 196-217) - 15/3/2007
10.1016/j.tcs.2006.11.025 View at source
- ISSN 03043975
- iMarina
- iMarina
Initialization method for grammar-guided genetic programming
- García-Arnau M
- Manrique D
- Ríos J
- Rodríguez-Patón A
Knowledge-Based Systems (p. 127-133) - 1/1/2007
10.1016/j.knosys.2006.11.006 View at source
- ISSN 09507051
P systems with symport/antiport and time
- Nagda H
- Pǎun A
- Rodríguez-Paton A
Lecture Notes In Computer Science (p. 463-476) - 1/12/2006
10.1007/11963516_29 View at source
- ISSN 03029743
This researcher has no working papers.
This researcher has no technical reports.
Descifrando las infecciones bacterianas con técnicas de inteligencia artificial e ingeniería de biocircuitos
- LOPEZ-MAROTO QUIÑONES, ALVARO (Miembro del equipo de trabajo)
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
- NUÑEZ BERRUECO, ELENA (Miembro del equipo de trabajo)
- Mitrana, Victor (Participante)
- SONG, TAO (Miembro del equipo de trabajo)
- BARREIRO SORRIVAS, JOSE MARIA (Participante)
- LEON PRIETO, LUCIA (Miembro del equipo de trabajo)
- MANRIQUE GAMO, DANIEL (Participante)
Period: 01-09-2023 - 31-08-2026
Type of funding: National
- iMarina
Placing the T3SS effector-network paradigm within a systems level understanding of in vivo infection
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
Period: 02-05-2022 - 01-05-2027
Type of funding: International
- iMarina
APLICACIÓN DE TÉCNICAS DE INTELIGENCIA ARTIFICIAL Y DE APRENDIZAJE AUTOMÁTICO PARA EL ANÁLISIS DE DATOS DE LA EMPRESA NEO SOLUCIONES INFORMÁTICAS SL
- GARCIA CUESTA, ESTEBAN (Colaborador/a)
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
Period: 06-04-2022 - 24-07-2022
Type of funding: Internal
- iMarina
Ultrasensitive BIOsensing platform for multiplex CELLular protein PHEnotyping at single-cell level
- LEON PRIETO, LUCIA (Participante)
- MANRIQUE GAMO, DANIEL (Participante)
- MÉNDEZ MERINO, DAVID (Participante)
- BARREIRO SORRIVAS, JOSE MARIA (Participante)
- González Martínez, Ángel Lucas (Participante)
- Fuertes Castro, José Luis (Participante)
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
Period: 01-04-2021 - 31-03-2025
Type of funding: International
Amount of funding: 303250,00 Euros.
- iMarina
Hacia la Inteligencia Artificial in vivo: programación de fármacos multicelulares vivos inteligentes
- LOPEZ-MAROTO QUIÑONES, ALVARO (Miembro del equipo de trabajo)
- SONG, TAO (Miembro del equipo de trabajo)
- MÉNDEZ MERINO, DAVID (Miembro del equipo de trabajo)
- Zeng NA, Xiangxiang (Miembro del equipo de trabajo)
- RODRIGUEZ REGUEIRA, MARCOS (Miembro del equipo de trabajo)
- SONG, TAO (Participante)
- NUÑEZ BERRUECO, ELENA (Miembro del equipo de trabajo)
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
- Fuertes Castro, José Luis (Participante)
- PAUN, PAUL ANDREI (Participante)
- MANRIQUE GAMO, DANIEL (Participante)
- BARREIRO SORRIVAS, JOSE MARIA (Participante)
- Mitrana, Victor (Participante)
Period: 01-06-2020 - 31-05-2023
Type of funding: National
Amount of funding: 87120,00 Euros.
- iMarina
PROgramable living drugs engineering MIcrobial CELLS
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
Period: 01-06-2019 - 31-05-2021
Type of funding: National
Amount of funding: 24700,00 Euros.
- iMarina
LIA. Ingeniería microbiana, salud y calidad de vida.
- MÉNDEZ MERINO, DAVID (Participante)
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
- SONG, TAO (Participante)
- RODRIGUEZ REGUEIRA, MARCOS (Participante)
- NUÑEZ BERRUECO, ELENA (Participante)
- ZENG, XIANGXIANG (Participante)
Period: 01-01-2018 - 30-06-2022
Type of funding: Regional
Amount of funding: 29881,60 Euros.
- iMarina
PROGRAMMABLE BIOLOGICAL MACHINES
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
Period: 01-09-2017 - 31-12-2020
Type of funding: National
Amount of funding: 24642,00 Euros.
- iMarina
Ingeniería de biocircuitos programables para computación analógica, multicelular y espacial
- MÉNDEZ MERINO, DAVID (Miembro del equipo de trabajo)
- HECTOR NIETO, MARIA ELENA (Miembro del equipo de trabajo)
- MARTINEZ CASTELLANO, EDUARDO (Miembro del equipo de trabajo)
- RODRIGUEZ REGUEIRA, MARCOS (Miembro del equipo de trabajo)
- RODRIGUEZ-PATON ARADAS, ALFONSO VICENTE (Investigador principal (IP))
- MANRIQUE GAMO, DANIEL (Participante)
- PAUN, PAUL ANDREI (Participante)
- BARREIRO SORRIVAS, JOSE MARIA (Participante)
- GAGO GARCIA, ESTHER (Participante)
- PAU DE LA CRUZ, IVAN (Participante)
Period: 30-12-2016 - 29-12-2020
Type of funding: National
Amount of funding: 90387,00 Euros.
- iMarina
Modelado computacional de la autoorganización espacial generada por circuitos genéticos multicelulares
- Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Rodríguez Regueira, Marcos
1/1/2021
- iMarina
Modelling bacterial ecological strategies using an individual-based simulator
- Rodríguez-Patón Aradas, Alfonso (Director)
- PAZOS SIERRA, Juan (Director) Doctorando: Gregorio Godoy, Paula
1/1/2018
- iMarina
Conditional plasmid conjugation as wiring for multicellular biocircuits: individual-based modeling and simulation
- Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Guillermo Pérez del Pulgar Frowein
1/1/2017
- iMarina
An end-to-end solution for automation of biological protocols
- Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Gupta, Vishal
1/1/2017
- iMarina
Modeling and analyzing the kinetic of conjugative plasmids
- Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Prestes García, Antonio
1/1/2017
- iMarina
A new agent-based platform for simulating multicellular biocircuits with conjugative plasmids
- Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Gutiérrez Pescarmona, Martín Eduardo
1/1/2017
- iMarina
Computación celular con membranas: un estudio de modelos de cómputo bioinspirados
- Rodríguez-Patón Aradas, Alfonso (Director) Doctorando: Pérez Pérez, David
1/1/2016
- iMarina
Inference Models in DNA Computing
- Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Iñaki Sainz de Murieta Fuentes
1/1/2013
- iMarina
Oscillatory genetic circuits: new designs and mathematical models
- Alfonso Rodríguez-Patón Aradas (Director) Doctorando: Jesús María Miró Bueno
1/1/2012
- iMarina
This researcher has no patents or software licenses.
Research groups
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Grupo de Inteligencia Artificial (LIA)
Role: Investigador Principal
Researcher profiles
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ORCID
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Publons
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