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Author profile at the institutional portal

Perez Perez, Ruben ruben.perez@uam.es

Física teórica de la materia condensada / Universidad Autónoma de Madrid

Publications

Structure and Defect Identification at Self-Assembled Islands of CO2 Using Scanning Probe Microscopy

  • Custance, O.
  • Ventura-Macías, E.
  • Stetsovych, O.
  • Romero-Muñiz, C.
  • Shimizu, T.K.
  • Pou, P.
  • Abe, M.
  • Hayashi, H.
  • Ohkubo, T.
  • Kawai, S.
  • Pérez, R.
... View more Collapse

Acs Nano (p. 26759-26769) - 17/9/2024

10.1021/acsnano.4c07034

  • ISSN 19360851
  • iMarina

Adsorption-Driven Deformation and Footprints of the RBD Proteins in SARS-CoV-2 Variants on Biological and Inanimate Surfaces

  • Bosch, Antonio M
  • Guzman, Horacio V
  • Perez, Ruben

Journal Of Chemical Information And Modeling (p. 5977-5990) - 31/7/2024

10.1021/acs.jcim.4c00460

  • ISSN 15499596
  • iMarina

Atomic force microscopy simulations for CO-functionalized tips with deep learning

  • Carracedo-Cosme, Jaime
  • Hapala, Prokop
  • Perez, Ruben

MACHINE LEARNING-SCIENCE AND TECHNOLOGY - 1/6/2024

10.1088/2632-2153/ad3ee6 View at source

  • ISSN 26322153

Systematic Comparison of Atomistic Force Fields for the Mechanical Properties of Double-Stranded DNA

  • Roldán-Piñero, C.
  • Luengo-Márquez, J.
  • Assenza, S.
  • Pérez, R.

Journal Of Chemical Theory And Computation (p. 2261-2272) - 27/2/2024

10.1021/acs.jctc.3c01089

  • ISSN 15499618
  • iMarina

Molecular identification with atomic force microscopy and conditional generative adversarial networks

  • Carracedo-Cosme, Jaime
  • Perez, Ruben

Npj Computational Materials - 1/12/2024

10.1038/s41524-023-01179-1 View at source

  • ISSN 20573960

Molecular identification via molecular fingerprint extraction from atomic force microscopy images.

  • González Lastre M
  • Pou P
  • Wiche M
  • Ebeling D
  • Schirmeisen A
  • Pérez R

Journal of Cheminformatics - 25/11/2024

  • ISSN 17582946
  • iMarina

Molecular Identification from AFM Images Using the IUPAC Nomenclature and Attribute Multimodal Recurrent Neural Networks

  • Carracedo-Cosme, Jaime
  • Romero-Muniz, Carlos
  • Pou, Pablo
  • Perez, Ruben

Acs Applied Materials & Interfaces (p. 22692-22704) - 1/5/2023

10.1021/acsami.3c01550

  • ISSN 19448244
  • iMarina

Force-dependent elasticity of nucleic acids

  • Luengo-Marquez, Juan
  • Zalvide-Pombo, Juan
  • Perez, Ruben
  • Assenza, Salvatore

Nanoscale (p. 6738-6744) - 16/3/2023

10.1039/d2nr06324g View at source

  • ISSN 20403364

Efficient Electron Hopping Transport through Azurin-Based Junctions

  • Roldan-Pinero, Carlos
  • Romero-Muniz, Carlos
  • Diez-Perez, Ismael
  • Vilhena, J G
  • Perez, Ruben
  • Cuevas, Juan Carlos
  • Zotti, Linda A
... View more Collapse

Journal Of Physical Chemistry Letters (p. 11242-11249) - 14/12/2023

10.1021/acs.jpclett.3c02702

  • ISSN 19487185
  • iMarina

Are High Resolution Atomic Force Microscopy images proportional to the force gradient or the force maps?

  • Ventura-Macias, Emiliano
  • Romero-Muniz, Carlos
  • Gonzalez-Sanchez, Pablo
  • Pou, Pablo
  • Perez, Ruben

Applied Surface Science - 15/10/2023

10.1016/j.apsusc.2023.157558 View at source

  • ISSN 01694332

This researcher has no books.

Análisis de la actividad antagónica de Trichoderma sp. sobre Fusarium graminearum, agente causal de fusariosis en trigo (Triticum aestivum

  • López Hernández, Kate Manuela
  • Pérez Pérez, Rubén
  • Orozco Montes, Salvador
  • Chávez, Mauricio

Ciencia Transdisciplinar Para El Desarrollo Y La Supervivencia De La Humanidad (p. 184-196) - 1/1/2021

  • iMarina

The electrostatic field of CO functionalized metal tips

  • Ellner, Michael
  • Pou, Pablo
  • Perez, Ruben

Springer Series In Surface Sciences (p. 465-497) - 1/1/2018

10.1007/978-3-319-75687-5_15 View at source

  • ISSN 09315195

Basic Mechanisms for Single Atom Manipulation in Semiconductor Systems with the FM-AFM

  • Pou, Pablo
  • Jelinek, Pavel
  • Perez, Ruben

Nanoscience And Technology (p. 227-249) - 1/1/2009

10.1007/978-3-642-01495-6_11 View at source

  • ISSN 14344904

Crystal Surfaces and Surface Structure

  • Perez Perez, Ruben
  • Ortega Mateo, Jose

Survey Of Semiconductor Physics (p. 63-129) - 1/1/2002

  • iMarina

Accurate Sequence-Dependent Coarse-Grained Model for Conformational and Elastic Properties of Double-Stranded DNA

  • Assenza, Salvatore
  • Perez, Ruben

Biophysical Journal (p. 222A-222A) - 12/2/2021

  • ISSN 00063495
  • iMarina

MULTICENTER PALLIATIVE CARE INTERVENTION ANALYSIS IN HEART FAILURE PATIENTS: CROSSING THE CHASM

  • Ferrer, Linda
  • Falconi, Giselle
  • Priyadarshni, Shivani
  • Perez, Ruben
  • Smithson, Shaun
  • Kashan, Sanaz
  • Curry, Bryan
... View more Collapse

JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY (p. 214-214) - 24/3/2020

  • ISSN 07351097
  • iMarina

Sequence-dependent bending in nucleic acids studied by atomic force microscopy and molecular dynamics

  • Marin-Gonzalez, A
  • Aicart-Ramos, C
  • Marin-Baquero, M
  • Vilhena, J G
  • Martin-Gonzalez, A
  • Perez, R
  • Moreno-Herrero, F
... View more Collapse

EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (p. S181-S181) - 1/7/2019

  • ISSN 01757571
  • iMarina

Sequence-dependent regulation of the mechanical properties of double stranded DNA and RNA at short length scales

  • Marin-Conzalez, A
  • Vilhena, J G
  • Moreno-Herrero, F
  • Perez, R

EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (p. S91-S91) - 1/7/2019

  • ISSN 01757571
  • iMarina

Intrinsic Bending in Nucleic Acids: A Combined Atomic-Force Microscopy and Molecular Dynamics Study

  • Marin-Gonzalez, Alberto
  • Vilhena, J G
  • Pastrana, Cesar L
  • Martin-Gonzalez, Alejandro
  • Aicart-Ramos, Clara
  • Perez, Ruben
  • Moreno-Herrero, Fernando
... View more Collapse

BIOPHYSICAL JOURNAL (p. 326A-326A) - 15/2/2019

10.1016/j.bpj.2018.11.1769 View at source

  • ISSN 00063495

Double-stranded DNA and RNA under constant stretching forces: insights from molecular dynamics

  • Marin-Gonzalez, A
  • Vilhena, J G
  • Perez, R
  • Moreno-Herrero, F

EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (p. S223-S223) - 1/7/2017

  • ISSN 01757571
  • iMarina

Optical Communications For Next Generation Automotive Networks

  • Ciordia, Oscar
  • Perez, Ruben
  • Pardo, Carlos

2017 22ND MICROOPTICS CONFERENCE (MOC) (p. 24-25) - 1/1/2017

  • iMarina

BLENDED LEARNING IN ELECTRONICS AND AUTOMATION ENGINEERING: A STUDY OF SOFTWARE AND HARDWARE NEEDS FOR PRACTICAL TEACHING

  • Aragues, Rosario
  • Gil, Eduardo
  • Igual, Raul
  • Medrano, Carlos
  • Delgado, Jorge
  • Albiol, Sergio
  • Romero, Francisco
  • Carlos Garcia, Juan
  • Perez, Ruben
... View more Collapse

9TH INTERNATIONAL CONFERENCE ON EDUCATION AND NEW LEARNING TECHNOLOGIES (EDULEARN17) (p. 274-283) - 1/1/2017

  • ISSN 23401117
  • iMarina

Friction force microscopy in water: A powerful technique for mechanical-crystallographic investigations

  • Gnecco, Enrico
  • Vilhena, Guilherme
  • Perez, Ruben
  • Pimentel, Carlos
  • Pina, Carlos M

ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY - 13/3/2016

  • ISSN 00657727
  • iMarina

SWOT ANALYSIS IN ORDER TO IMPROVE MARINE ENGINEERING STUDIES

  • Perez, R
  • Leo, T
  • Diaz, D

ICERI2016: 9TH INTERNATIONAL CONFERENCE OF EDUCATION, RESEARCH AND INNOVATION (p. 7217-7223) - 1/1/2016

  • ISSN 23401095
  • iMarina

This researcher has no working papers.

This researcher has no technical reports.

COVALENT AND METALORGANIC FRAMEWORKS FOR WATER PURIFICATION OF PHARMACEUTICAL CONTAMINANTS

  • Ares Garcia, Pablo (Investigador principal (IP))

Period: 01-01-2025 - 31-12-2028

  • iMarina

Herramientas de simulación y aprendizaje automático para la caracterización de la estructura y la respuesta mecánica de materiales avanzados y biomoléculas

  • Pou Bell, Pablo (Investigador/a)
  • GONZALEZ LASTRE, MANUEL EDUARDO (Investigador/a)
  • LUENGO MARQUEZ, JUAN (Investigador/a)
  • TRUJILLO MULERO, JARA (Investigador/a)
  • Assenza, Salvatore (Investigador principal (IP))
  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-09-2024 - 31-08-2027

  • iMarina

Acreditación a unidades de excelencia María de Maeztu

  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-04-2024 - 31-03-2028

  • iMarina

UAM2023-UAM/208 | Rubén Pérez Pérez / Gestión de I+D asociada a las actividades de investigación, solicitudes de proyectos y ejecución de los vigentes

  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-01-2024 - 31-12-3000

Amount of funding: 0,00 Euros.

  • iMarina

MECÁNICA DEL CALOR: UNIENDO TRANSPORTE DE CALOR Y FRICCIÓN EN LA NANOESCALA

  • Gomez Herrero, Julio (Investigador/a)
  • Perez Perez, Ruben (Investigador/a)
  • Cuadra Veliz, Jorge (Investigador/a)
  • Gomez-Navarro Gonzalez, Cristina (Investigador/a)
  • Vilhena Albuquerque D'Orey, Jose Guilherme (Investigador principal (IP))
  • Ares Garcia, Pablo (Investigador principal (IP))

Period: 01-12-2022 - 30-11-2024

Type of funding: National

Amount of funding: 270250,00 Euros.

  • iMarina

Desarrollo de nanocatalizadores más eficientes para la oxidación de hidrocarburos

  • Perez Perez, Ruben (Investigador/a)
  • Martinez Galera, Antonio Javier (Investigador principal (IP))

Period: 01-01-2022 - 31-12-2023

Type of funding: Regional

Amount of funding: 41876,40 Euros.

  • iMarina

Electron transport through protein-based hybrid junctions and role of mutations

  • Perez Perez, Ruben (Investigador/a)
  • Cuevas Rodriguez, Juan Carlos (Investigador/a)
  • Zotti, Linda Angela (Investigador principal (IP))

Period: 01-01-2022 - 31-12-2023

Type of funding: Regional

Amount of funding: 39780,00 Euros.

  • iMarina

Identificación química y control de las propiedades electrónicas y mecánicas de sistemas moleculares mediante microscopias de proximidad y aprendizaje automático

  • Assenza, Salvatore (Investigador/a)
  • VENTURA MACIAS, MIGUEL EMILIANO (Investigador/a)
  • Pou Bell, Pablo (Investigador principal (IP))
  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-09-2021 - 31-08-2024

Type of funding: National

Amount of funding: 157300,00 Euros.

  • iMarina

Explorando la interacción entre partículas víricas y materiales: fundamentos y aplicaciones profilácticas (PROYECTO)

  • Gomez Herrero, Julio (Investigador/a)
  • Pou Bell, Pablo (Investigador/a)
  • Perez Perez, Ruben (Investigador/a)
  • Delgado Buscalioni, Rafael (Investigador/a)
  • Aleman Lara, Jose Julian (Investigador/a)
  • Gomez-Navarro Gonzalez, Cristina (Investigador/a)
  • Zamora Abanades, Felix Juan (Investigador/a)
  • de Pablo Gomez, Pedro Jose (Investigador principal (IP))
... View more Collapse

Period: 01-02-2020 - 31-12-2022

Type of funding: National

Amount of funding: 1000443,00 Euros.

  • iMarina

Red temática de excelencia en física virológica II

  • Hernández Rojas, Javier (Investigador principal (IP))
  • de Pablo Gomez, Pedro Jose (Investigador principal (IP))
  • PEREZ PEREZ;, RUBEN (Investigador/a)
  • Garcia Mateu, Mauricio (Investigador/a)

Period: 01-07-2018 - 31-12-2020

  • iMarina

Modificaciones químicas en diversos motivos del DNA y sus efectos estructurales

  • González Ibáñez, Carlos (Director)
  • Perez Perez, Ruben (Tutor) Doctorando: Cabrero Fernández, Cristina

6/10/2023

  • iMarina

Imaging molecules at surfaces: First-principles methods for Force and Tunneling Microscopy with CO tips

  • Pou Bell, Pablo (Director)
  • Perez Perez, Ruben (Director) Doctorando: VENTURA MACIAS, MIGUEL EMILIANO

1/1/2023

  • iMarina

Redes de adsorbatos sobre superficies grafeno/metal: Una plataforma para optimizar puntas para microscopia de proximidad

  • Gomez Herrero, Julio (Director)
  • Gomez Rodriguez, Jose Maria (Director)
  • Perez Perez, Ruben (Autor o Coautor)
  • Otero Martin, Roberto (Autor o Coautor) Doctorando: Jiménez Sánchez, Mariano Domingo

9/9/2021

  • iMarina

Molecular identification based on Atomic Force Microscopy Images and Machine Learning

  • Garnica Alonso, Manuela (Otros)
  • Bravo Abad, Jorge (Otros)
  • Martinez Muñoz, Gonzalo (Otros)
  • Rubén Pérez Pérez (Director) Doctorando: Carracedo Cosme, Jaime

8/11/2021

  • iMarina

Combining molecular dynamics simulations and atomic force microscopy experiments to rationalize the mechanical properties of double-stranded DNA and RNA

  • Tarazona Lafarga, Pedro Jose (Autor o Coautor)
  • Moreno Herrero, Fernando (Director)
  • Perez Perez, Ruben (Director) Doctorando: Marín González, Alberto

6/3/2020

  • iMarina

Modificación de propiedades dinámicas en la nanoescala mediante alteraciones atómicas: perspectivas obtenidas mediante simulaciones de dinámica molecular

  • Tarazona Lafarga, Pedro Jose (Autor o Coautor)
  • Perez Perez, Ruben (Director)
  • Guilherme Vilhena, Jose (Director)
  • Gomez Herrero, Julio (Autor o Coautor)
  • Velez Tirado, Marisela (Autor o Coautor) Doctorando: Ortega Cruz, María

31/1/2020

  • iMarina

Advanced force spectroscopy applications: three-dimensional afm and single-molecule force spectroscopy

  • Garcia Garcia, Ricardo (Director)
  • Perez Perez, Ruben (Autor o Coautor)

1/1/2020

  • iMarina

Fabricación de nanodispositivos de materiales bidimensionales mediante la nanolitografía de oxidación local

  • Garcia Garcia, Ricardo (Director)
  • Perez Perez, Ruben (Tutor) Doctorando: Iglesias del Dago, Arancha

28/6/2019

  • iMarina

Nanomecánica celular determinada por Microscopía de Fuerzas Atómicas

  • Garcia Garcia, Ricardo (Director)
  • Perez Perez, Ruben (Tutor) Doctorando: Guerrero Rodríguez, Carlos R.

31/5/2019

  • iMarina

Teoría del microscopio de fuerzas para determinar propiedades nanomecánicas en células

  • Garcia Garcia, Ricardo (Director)
  • Pou Bell, Pablo (Tutor) Doctorando: García López, Pablo David

1/1/2019

  • iMarina

A computer implemented method for identifying a molecule from atomic force microscopy images and generating the name of said molecule according to the iupac nomenclature

  • Carracedo Cosme, Jaime (Autor o Coautor)
  • Perez Perez, Ruben (Autor o Coautor)

2/11/2023

  • iMarina

A computer implemented method for identifying a organic molecule from atomic force microscopy images by generating a 2d colored rgb structural representation of said molecule in the form of a ball-and-stick depiction

  • Perez Perez, Ruben (Autor o Coautor)

1/1/2022

  • iMarina

Intermediate band semiconductor photovoltaic solar cell

  • Perez Perez, Ruben (Inventores/autores/obtentores)
  • Ortega Mateo, Jose (Inventores/autores/obtentores)

9/6/2000

  • iMarina

CELULA SOLAR FOTOVOLTAICA DE SEMICONDUCTOR DE BANDA INTERMEDIA

  • LUQUE LOPEZ, Antonio (Inventores/autores/obtentores)
  • Flores Sintas, Fernando (Inventores/autores/obtentores)
  • MARTI VEGA, Antonio (Inventores/autores/obtentores)
  • CONESA CEGARRA, José Carlos (Inventores/autores/obtentores)
  • WAHNON BENARROCH, Perla (Inventores/autores/obtentores)
  • Ortega Mateo, Jose (Inventores/autores/obtentores)
  • TABLERO CRESPO, César (Inventores/autores/obtentores)
  • Perez Perez, Ruben (Inventores/autores/obtentores)
  • CUADRA RODRIGUEZ, Lucas (Inventores/autores/obtentores)
... View more Collapse

21/12/2000

  • iMarina
Last data update: 11/24/25 11:21 PM