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Author profile at the institutional portal

Perez Perez, Ruben ruben.perez@uam.es

Física teórica de la materia condensada / Universidad Autónoma de Madrid

Publications

Systematic Comparison of Atomistic Force Fields for the Mechanical Properties of Double-Stranded DNA

  • Roldan-Pinero, Carlos
  • Luengo-Marquez, Juan
  • Assenza, Salvatore
  • Perez, Ruben

Journal Of Chemical Theory And Computation (p. 2261-2272) - 27/2/2024

10.1021/acs.jctc.3c01089

  • ISSN 15499618
  • iMarina

Molecular identification with atomic force microscopy and conditional generative adversarial networks

  • Carracedo-Cosme, J
  • Perez, R

Npj Computational Materials - 1/12/2024

10.1038/s41524-023-01179-1 View at source

  • ISSN 20573960

Molecular Identification from AFM Images Using the IUPAC Nomenclature and Attribute Multimodal Recurrent Neural Networks

  • Carracedo-Cosme, J.
  • Romero-Muñiz, C.
  • Pou, P.
  • Pérez, R.

Acs Applied Materials & Interfaces (p. 22692-22704) - 1/5/2023

10.1021/acsami.3c01550

  • ISSN 19448244
  • iMarina

Force-dependent elasticity of nucleic acids

  • Luengo-Márquez, J.
  • Zalvide-Pombo, J.
  • Pérez, R.
  • Assenza, S.

Nanoscale (p. 6738-6744) - 16/3/2023

10.1039/d2nr06324g View at source

  • ISSN 20403364

Efficient Electron Hopping Transport through Azurin-Based Junctions

  • Roldan-Pinero, Carlos
  • Romero-Muniz, Carlos
  • Diez-Perez, Ismael
  • Vilhena, J G
  • Perez, Ruben
  • Cuevas, Juan Carlos
  • Zotti, Linda A
... View more Collapse

Journal Of Physical Chemistry Letters (p. 11242-11249) - 14/12/2023

10.1021/acs.jpclett.3c02702

  • ISSN 19487185
  • iMarina

Are High Resolution Atomic Force Microscopy images proportional to the force gradient or the force maps?

  • Ventura-Macías, E.
  • Romero-Muñiz, C.
  • González-Sánchez, P.
  • Pou, P.
  • Pérez, R.

Applied Surface Science - 15/10/2023

10.1016/j.apsusc.2023.157558 View at source

  • ISSN 01694332

Sequence-Specific Features of Short Double-Strand, Blunt-End RNAs Have RIG-I-and Type 1 Interferon-Dependent or-Independent Anti-Viral Effects

  • Kannan A
  • Suomalainen M
  • Volle R
  • Bauer M
  • Amsler M
  • Trinh HV
  • Vavassori S
  • Schmid JP
  • Vilhena G
  • Marín-González A
  • Perez R
  • Franceschini A
  • von Mering C
  • Hemmi S
  • Greber UF
... View more Collapse

Viruses-Basel - 1/7/2022

10.3390/v14071407 View at source

  • ISSN 19994915

Flexible Superlubricity Unveiled in Sidewinding Motion of Individual Polymeric Chains

  • Vilhena, J. G.
  • Pawlak, Remy
  • D'Astolfo, Philipp
  • Liu, Xunshan
  • Gnecco, Enrico
  • Kisiel, Marcin
  • Glatzel, Thilo
  • Perez, Ruben
  • Haener, Robert
  • Decurtins, Silvio
  • Baratoff, Alexis
  • Prampolini, Giacomo
  • Liu, Shi-Xia
  • Meyer, Ernst;
... View more Collapse

Physical Review Letters - 27/5/2022

10.1103/physrevlett.128.216102 View at source

  • ISSN 00319007

QUAM-AFM: A Free Database for Molecular Identification by Atomic Force Microscopy

  • Carracedo-Cosme J, Romero-Muñiz C, Pou P, Pérez R

Journal Of Chemical Information And Modeling (p. 1214-1223) - 14/3/2022

10.1021/acs.jcim.1c01323

  • ISSN 15499596
  • iMarina

Hygroscopy of Single-Stranded DNA Nano-Brushes: Atomic Workings of its Hydration-Induced Deformation

  • Ortega M
  • Vilhena JG
  • Pérez R

Advanced Materials Interfaces - 2/12/2022

10.1002/admi.202201272 View at source

  • ISSN 21967350

This researcher has no books.

Análisis de la actividad antagónica de Trichoderma sp. sobre Fusarium graminearum, agente causal de fusariosis en trigo (Triticum aestivum

  • López Hernández, Kate Manuela
  • Pérez Pérez, Rubén
  • Orozco Montes, Salvador
  • Chávez, Mauricio

Ciencia Transdisciplinar Para El Desarrollo Y La Supervivencia De La Humanidad (p. 184-196) - 1/1/2021

  • iMarina

The electrostatic field of CO functionalized metal tips

  • Ellner M., Pou P., Perez R.

Springer Series In Surface Sciences (p. 465-497) - 1/1/2018

10.1007/978-3-319-75687-5_15 View at source

  • ISSN 09315195

Basic Mechanisms for Single Atom Manipulation in Semiconductor Systems with the FM-AFM

  • Pou, Pablo
  • Jelinek, Pavel
  • Perez, Ruben;

Nanoscience And Technology (p. 227-249) - 1/1/2009

10.1007/978-3-642-01495-6_11 View at source

  • ISSN 14344904

Crystal Surfaces and Surface Structure

  • Perez Perez, Ruben
  • Ortega Mateo, Jose

Survey Of Semiconductor Physics (p. 63-129) - 1/1/2002

  • iMarina

Accurate Sequence-Dependent Coarse-Grained Model for Conformational and Elastic Properties of Double-Stranded DNA

  • Assenza, Salvatore
  • Perez, Ruben;

Biophysical Journal (p. 222A-222A) - 12/2/2021

  • ISSN 00063495
  • iMarina

Support-morphology induced modification of adsorbate bonding to nanoparticles

  • Perez Perez, Ruben

Acs National Meeting Book Of Abstracts - 16/3/2014

  • ISSN 00657727
  • iMarina

Mechanical Response and Energy-Dissipation Processes in OligothiopheneMonolayers Studied with First-Principles Simulations

  • Kaminski, Wojciech
  • Perez, Ruben;

Tribology Letters (p. 295-309) - 1/9/2010

10.1007/s11249-010-9662-9 View at source

  • ISSN 10238883

Mechanical properties and electrical conductance of different A1 nanowires submitted to an homogeneous deformation: a first-principles simulation

  • Jelínek, P
  • Pérez, R
  • Ortega, J
  • Flores, F;

Surface Science (p. 13-23) - 20/9/2004

10.1016/j.susc.2004.05.014 View at source

  • ISSN 00396028

Barrier formation at metal-organic interfaces: dipole formation and the charge neutrality level

  • Vázquez, H
  • Flores, F
  • Oszwaldowski, R
  • Ortega, J
  • Pérez, R
  • Kahn, A;

Applied Surface Science (p. 107-112) - 15/7/2004

10.1016/j.apsusc.2004.05.084 View at source

  • ISSN 01694332

Si-substitutional defects on the alpha-Sn/Si(111)-(root 3 x root 3) surface

  • Kaminski, W
  • Jelinek, P
  • Pérez, R
  • Flores, F
  • Ortega, J;

Applied Surface Science (p. 286-291) - 15/7/2004

10.1016/j.apsusc.2004.05.083 View at source

  • ISSN 01694332

Schottky contacts on passivated GaAs(100) surfaces: barrier height and reactivity

  • Kampen, T
  • Schuller, A
  • Zahn, DRT
  • Biel, B
  • Ortega, J
  • Perez, R
  • Flores, F;
... View more Collapse

Applied Surface Science (p. 341-348) - 15/7/2004

10.1016/j.apsusc.2004.05.257 View at source

  • ISSN 01694332

Phonon dynamics of the Sn/Ge(1 1 1)-(3 × 3) surface

  • Farías, D
  • Kaminski, W
  • Lobo, J
  • Ortega, J
  • Hulpke, E
  • Pérez, R
  • Flores, F
  • Michel, EG;
... View more Collapse

Applied Surface Science (p. 86-92) - 15/10/2004

10.1016/j.apsusc.2004.06.150 View at source

  • ISSN 01694332

Chalcogen passivation of GaAs(100) surfaces: theoretical study

  • Szücs, B
  • Hajnal, Z
  • Frauenheim, T
  • González, C
  • Ortega, J
  • Pérez, R
  • Flores, F;
... View more Collapse

Applied Surface Science (p. 861-865) - 15/5/2003

10.1016/s0169-4332(03)00016-3 View at source

  • ISSN 01694332

Surface properties of chalcogen passivated GaAs(1 0 0)

  • Kampen T
  • Zahn D
  • Braun W
  • González C
  • Benito I
  • Ortega J
  • Jurczyszyn L
  • Blanco J
  • Pérez R
  • Flores F
... View more Collapse

Applied Surface Science (p. 850-855) - 15/5/2003

10.1016/s0169-4332(03)00364-7 View at source

  • ISSN 01694332

This researcher has no working papers.

This researcher has no technical reports.

UAM2023-UAM/208 | Rubén Pérez Pérez / Gestión de I+D asociada a las actividades de investigación, solicitudes de proyectos y ejecución de los vigentes

  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-01-2024 - 31-12-3000

Amount of funding: 0,00 Euros.

  • iMarina

Desarrollo de nanocatalizadores más eficientes para la oxidación de hidrocarburos

  • Perez Perez, Ruben (Investigador/a)
  • Martinez Galera, Antonio Javier (Investigador principal (IP))

Period: 01-01-2022 - 31-12-2023

Type of funding: Regional

Amount of funding: 41876,40 Euros.

  • iMarina

Identificación química y control de las propiedades electrónicas y mecánicas de sistemas moleculares mediante microscopias de proximidad y aprendizaje automático

  • VENTURA MACIAS, MIGUEL EMILIANO (Investigador/a)
  • Pou Bell, Pablo (Investigador principal (IP))
  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-09-2021 - 31-08-2024

Type of funding: National

Amount of funding: 157300,00 Euros.

  • iMarina

Red temática de excelencia en física virológica II

  • Ruiz Caston, José (Investigador/a)
  • Perez Perez, Ruben (Investigador/a)
  • Abrescia, Nicola Gerard (Investigador/a)
  • de Pablo Gomez, Pedro Jose (Investigador principal (IP))
  • Hernández Rojas, Javier (Investigador principal (IP))
  • PEREZ PEREZ;, RUBEN (Investigador/a)
  • Garcia Mateu, Mauricio (Investigador/a)
... View more Collapse

Period: 01-07-2018 - 31-12-2020

  • iMarina

Caracterización a escala atómica de nuevos materiales 2D funcionalizados con moleculas orgánicas y biomoléculas mediante microscopias de proximidad

  • Perez Perez, Ruben (Investigador principal (IP))
  • Pou Bell, Pablo (Investigador principal (IP))

Period: 01-01-2018 - 31-12-2020

Type of funding: National

Amount of funding: 121000,00 Euros.

  • iMarina

Molecular identification by machine learning analysis of atomic force microscopy images

  • Carracedo Cosme, Jaime (Contratado/a)
  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-01-2018 - 31-12-2020

Amount of funding: 70270,00 Euros.

  • iMarina

Charge and heat transport in atomic, molecular and protein-based junctions

  • PEREZ PEREZ RUBEN (Investigador/a)
  • CUEVAS RODRIGUEZ JUAN CARLOS (Investigador/a)
  • Agrait de la Puente, Mario Nicolas (Investigador principal (IP))

Period: 01-01-2017 - 30-06-2019

Type of funding: National

Amount of funding: 160000,00 Euros.

  • iMarina

Non-equilibrium self-assembly of complex materials. Centro de Investigacion de Fisica de la Materia Condensada (IFIMAC)

  • PRINS, FERRY (Investigador/a)
  • Lee ., Eduardo Jian Hua (Investigador/a)
  • Perez Perez, Ruben (Investigador/a)
  • GOMEZ RODRIGUEZ, MARIA (Investigador/a)
  • Soler Torroja, Jose Maria (Investigador/a)
  • Agrait de la Puente, Mario Nicolas (Investigador/a)
  • Gomez Herrero, Julio (Investigador/a)
  • Yeyati, Alfredo Levy (Investigador/a)
  • Aliev Kazanski, Farkhad (Investigador principal (IP))
  • ARAGONES GOMEZ, JUAN LUIS (Investigador principal (IP))
  • Garcia Vidal, Fco Jose (Investigador principal (IP))
... View more Collapse

Period: 01-07-2015 - 30-06-2019

Type of funding: National

Amount of funding: 2000000,00 Euros.

  • iMarina

Microscopias de túnel y fuerzas en materiales 2D, óxidos reducibles y biomoléculas en un entorno y condiciones de operación realistas

  • Pou Bell, Pablo (Investigador/a)
  • Perez Perez, Ruben (Investigador principal (IP))

Period: 01-01-2015 - 31-12-2017

Type of funding: National

Amount of funding: 81000,00 Euros.

  • iMarina

Implementación de modelos computacionales masivamente paralelos.

  • Gonzalez Martinez, Ivan (Investigador principal (IP))
  • Corcoles Ortega, Juan (Miembro de equipo)

Period: 01-04-2013 - 30-09-2015

  • iMarina

Redes de adsorbatos sobre superficies grafeno/metal: Una plataforma para optimizar puntas para microscopia de proximidad

  • Gomez Herrero, Julio (Director)
  • Gomez Rodriguez, Jose Maria (Director)
  • Perez Perez, Ruben (Autor o Coautor)
  • Otero Martin, Roberto (Autor o Coautor) Doctorando: Jiménez Sánchez, Mariano Domingo

9/9/2021

  • iMarina

Molecular identification based on Atomic Force Microscopy Images and Machine Learning

  • Garnica Alonso, Manuela (Otros)
  • Bravo Abad, Jorge (Otros)
  • Martinez Muñoz, Gonzalo (Otros)
  • Rubén Pérez Pérez (Director) Doctorando: Carracedo Cosme, Jaime

8/11/2021

  • iMarina

Combining molecular dynamics simulations and atomic force microscopy experiments to rationalize the mechanical properties of double-stranded DNA and RNA

  • Tarazona Lafarga, Pedro Jose (Autor o Coautor)
  • Moreno Herrero, Fernando (Director)
  • Perez Perez, Ruben (Director) Doctorando: Marín González, Alberto

6/3/2020

  • iMarina

Modificación de propiedades dinámicas en la nanoescala mediante alteraciones atómicas: perspectivas obtenidas mediante simulaciones de dinámica molecular

  • Tarazona Lafarga, Pedro Jose (Autor o Coautor)
  • Perez Perez, Ruben (Director)
  • Guilherme Vilhena, Jose (Director)
  • Gomez Herrero, Julio (Autor o Coautor)
  • Velez Tirado, Marisela (Autor o Coautor) Doctorando: Ortega Cruz, María

31/1/2020

  • iMarina

Advanced force spectroscopy applications: three-dimensional afm and single-molecule force spectroscopy

  • Garcia Garcia, Ricardo (Director)
  • Perez Perez, Ruben (Autor o Coautor)

1/1/2020

  • iMarina

Fabricación de nanodispositivos de materiales bidimensionales mediante la nanolitografía de oxidación local

  • Garcia Garcia, Ricardo (Director)
  • Perez Perez, Ruben (Tutor) Doctorando: Iglesias del Dago, Arancha

28/6/2019

  • iMarina

Nanomecánica celular determinada por Microscopía de Fuerzas Atómicas

  • Garcia Garcia, Ricardo (Director)
  • Perez Perez, Ruben (Tutor) Doctorando: Guerrero Rodríguez, Carlos R.

31/5/2019

  • iMarina

Teoría del microscopio de fuerzas para determinar propiedades nanomecánicas en células

  • Garcia Garcia, Ricardo (Director)
  • Pou Bell, Pablo (Tutor) Doctorando: García López, . Pablo David

1/1/2019

  • iMarina

La litografía de oxidación local para la fabricación de dispositivos nanoelectrónicos

  • Gomez Herrero, Julio (Autor o Coautor)
  • Ricardo García García (Director)
  • Rubén Pérez Pérez (Director) Doctorando: Francisco Miguel Espinosa Barea

21/9/2018

  • iMarina

Fast and accurate methods to unveil the mechanisms of contrast formation in High Resolution Force Microscopy

  • Gomez Herrero, Julio (Autor o Coautor)
  • Ortega Mateo, Jose (Autor o Coautor)
  • Rubén Pérez Pérez (Director)
  • Pablo Pou Bell (Director)
  • Pou Bell, Pablo (Autor o Coautor) Doctorando: Michael Ellner Martínez

15/6/2018

  • iMarina

A computer implemented method for identifying a molecule from atomic force microscopy images and generating the name of said molecule according to the iupac nomenclature

  • Carracedo Cosme, Jaime (Autor o Coautor)
  • Perez Perez, Ruben (Autor o Coautor)

2/11/2023

  • iMarina

A computer implemented method for identifying a organic molecule from atomic force microscopy images by generating a 2d colored rgb structural representation of said molecule in the form of a ball-and-stick depiction

  • Carracedo Cosme, Jaime (Autor o Coautor)
  • Perez Perez, Ruben (Autor o Coautor)

1/1/2022

  • iMarina

Intermediate band semiconductor photovoltaic solar cell

  • Perez Perez, Ruben (Inventores/autores/obtentores)
  • Ortega Mateo, Jose (Inventores/autores/obtentores)

9/6/2000

  • iMarina

CELULA SOLAR FOTOVOLTAICA DE SEMICONDUCTOR DE BANDA INTERMEDIA

  • LUQUE LOPEZ ANTONIO (Inventores/autores/obtentores)
  • FLORES SINTAS FERNANDO (Inventores/autores/obtentores)
  • MARTÍ VEGA ANTONIO (Inventores/autores/obtentores)
  • CONESA CEGARRA JOSE CARLOS (Inventores/autores/obtentores)
  • ORTEGA MATEO JOSE (Inventores/autores/obtentores)
  • TABLERO CRESPO CESAR (Inventores/autores/obtentores)
  • PEREZ PEREZ RUBEN (Inventores/autores/obtentores)
  • CUADRA RODRIGUEZ LUCAS (Inventores/autores/obtentores)
  • WAHNON BENARROCH PERLA (Inventores/autores/obtentores)
... View more Collapse

21/12/2000

  • iMarina
Last data update: 8/28/24 11:56 AM