The data shown for the Universidad Carlos III de Madrid are partial, as they are intended to answer 2 questions:

  • Who is researching a specific topic?
  • What is an expert, group or particular department researching?

The search results will adhere to the following limits: active Researchers at Carlos III University of Madrid, Projects since 2006 and Publications, Theses, Patents and Software since 2008.

Muñoz Barrutia, Maria Arrate mamunozb@ing.uc3m.es

Publications

The Cell Tracking Challenge: 10 years of objective benchmarking

  • Maška, Martin
  • Ulman, Vladimir
  • Delgado Rodriguez, Pablo
  • Gomez De Mariscal, Estibaliz
  • Guerrero Peña, Fidel A.
  • Ren, Tsang Ing
  • Meyerowitz, Elliot M.
  • Scherr, Tim
  • Loffler, Katharina
  • Mikut, Ralf
  • Guo, Tianqi
  • Wang, Yin
  • Allebach, Jan P.
  • Bao, Rina
  • Al Shakarji, Noor M.
  • Rahmon, Gani
  • Toubal, Imad Eddine
  • Palaniappan, Kannappan
  • Lux, Filip
  • Matula, Petr
  • Sugawara, Ko
  • Magnusson, Klas E.g.
  • Aho, Layton
  • Cohen, Andrew R.
  • Arbelle, Assaf
  • Ben Haim, Tal
  • Raviv, Tammy Riklin
  • Isensee, Fabian
  • Jäger, Paul F.
  • Maier Hein, Klaus H.
  • Zhu, Yanming
  • Ederra, Cristina
  • Urbiola, Ainhoa
  • Meijering, Erik
  • Cunha, Alexandre
  • Muñoz Barrutia, Maria Arrate
  • Kozubek, Michal
  • Ortiz De Solorzano, Carlos
... View more Collapse

NATURE METHODS - 7/2023

https://doi.org/10.1038/s41592-023-01879-y View at source

  • ISSN 1548-7091

From Nano to Macro: An overview of the IEEE Bio Image and Signal Processing Technical Committee

  • Aviyente, Selin
  • Frangi, Alejandro F.
  • Meijering, Erik
  • Muñoz Barrutia, Maria Arrate
  • Liebling, Michael
  • Van De Ville, Dimitri
  • Olivo Marin, Jean Christophe
  • Kovacevic, Jelena
  • Unser, Michael
... View more Collapse

IEEE SIGNAL PROCESSING MAGAZINE - 6/2023

https://doi.org/10.1109/msp.2023.3242833 View at source

  • EISSN 1558-0792
  • ISSN 1053-5888
Open Access

ABANICCO: A New Color Space for Multi-Label Pixel Classification and Color Analysis

  • Nicolas Saenz, Laura
  • Ledezma Espino, Agapito Ismael
  • Pascau Gonzalez Garzon, Javier
  • Muñoz Barrutia, Maria Arrate

Sensors (p. 1-23) - 3/2023

https://doi.org/10.3390/s23063338 View at source

  • EISSN 1424-8220
  • ISSN 1424-3210
Open Access

Deep learning based domain adaptation for mitochondria segmentation on EM volumes

  • Franco Barranco, Daniel
  • Pastor Tronch, Julio
  • Gonzalez Marfil, Aitor
  • Muñoz Barrutia, Maria Arrate
  • Arganda Carreras, Ignacio

Computer Methods and Programs in Biomedicine (p. 1-11) - 7/2022

https://doi.org/10.1016/j.cmpb.2022.106949 View at source

  • ISSN 0169-2607
Open Access

Magneto-mechanical system to reproduce and quantify complex strain patterns in biological materials

  • Moreno Mateos, Miguel Angel
  • Gonzalez Rico, Jorge
  • Nunez Sardinha, Emanuel
  • Gomez Cruz, Clara
  • Lopez Donaire, Maria Luisa
  • Lucarini San José, Sergio
  • Arias Hernandez, Angel
  • Muñoz Barrutia, Maria Arrate
  • Velasco Bayon, Diego
  • Garcia Gonzalez, Daniel
... View more Collapse

Applied Materials Today (p. 1-15) - 6/2022

https://doi.org/10.1016/j.apmt.2022.101437 View at source

  • ISSN 2352-9407
Open Access

Stable deep neural network architectures for mitochondria segmentation on electron microscopy volumes

  • Franco Barranco, Daniel
  • Muñoz Barrutia, Maria Arrate
  • Arganda Carreras, Ignacio

NEUROINFORMATICS (p. 437-450) - 4/2022

https://doi.org/10.1007/s12021-021-09556-1 View at source

  • EISSN 1559-0089
  • ISSN 1539-2791
Open Access

Reduction of motion effects in myocardial arterial spin labeling

  • Aramendia Vidaurreta, Veronica
  • Macias Gordaliza, Pedro
  • Vidorreta, Marta
  • Echeverria Chasco, Rebeca
  • Bastarrika, Gorka
  • Muñoz Barrutia, Maria Arrate
  • Fernández-seara, María A.
... View more Collapse

MAGNETIC RESONANCE IN MEDICINE (p. 1261-1275) - 3/2022

https://doi.org/10.1002/mrm.29038 View at source

  • EISSN 1522-2594
  • ISSN 0740-3194
Open Access

Single plane illumination microscopy for microfluidic device imaging

  • Gomez Cruz, Clara
  • Laguna, Sonia
  • Bachiller Pulido, Ariadna
  • Quilez Lopez, Cristina
  • Cañadas Ortega, Marina
  • Albert Smet, Ignacio
  • Ripoll Lorenzo, Jorge
  • Muñoz Barrutia, Maria Arrate
... View more Collapse

Biosensors (p. 1-13) - 12/2022

https://doi.org/10.3390/bios12121110 View at source

  • ISSN 2079-6374

Automatic determination of the handedness of single-particle maps of macromolecules solved by CryoEM

  • Garcia Condado, J.
  • Muñoz Barrutia, Maria Arrate
  • Sorzano, C.o.s.

JOURNAL OF STRUCTURAL BIOLOGY (p. 1-6) - 12/2022

https://doi.org/10.1016/j.jsb.2022.107915 View at source

  • ISSN 1047-8477

Correction: Image processing tools for the validation of CryoEM maps

  • Sorzano, C. O. S.
  • Muñoz Barrutia, Maria Arrate

FARADAY DISCUSSIONS (p. 228-228) - 11/2022

https://doi.org/10.1039/d2fd90074b View at source

  • ISSN 1359-6640

This researcher has no books.

Open Access

Building a bioimage analysis workflow using deep learning. In: Bioimage data analysis workflows ¿ Advanced components and methods

  • Gomez De Mariscal, Estibaliz
  • Franco Barranco, Daniel
  • Muñoz Barrutia, Maria Arrate
  • Arganda Carreras, Ignacio

Bioimage data analysis workflows ¿ Advanced components and methods (p. 61-87) - 9/2022

Editor: Springer Berlin / Heidelberg

https://doi.org/10.1007/978-3-030-76394-7_4 View at source

  • ISBN 978-3-030-76394-7

Emerging technologies and outlook. In: ImagingModalitiesforBiological andPreclinicalResearch: ACompendium,Volume2 Parts II&-IV: In vivo preclinical imaging, multimodality imaging and outlook

  • Walter, Andreas
  • Muñoz Barrutia, Maria Arrate
  • Jones, Martin
  • Mannheim, Julia G
  • Collinson, Lucy
  • Andreana, Marco
  • Unterhuber, Angelika
  • Verkade, Paul
... View more Collapse

ImagingModalitiesforBiological andPreclinicalResearch: ACompendium,Volume2 Parts II&-IV: In vivo preclinical imaging, multimodality imaging and outlook (p. V.1-1-IV.1-14) - 5/2021

Editor: IOP PUBLISHING LTD

https://doi.org/10.1088/978-0-7503-3747-2ch31 View at source

  • ISBN 978-0-7503-3747-2
Open Access

Acquisition and Automated Analysis of Normal and Pathological Lungs in Small Animals Using Microcomputed Tomography. In: Lung Imaging and Computer Aided Diagnosis

  • Artaechevarria, X.
  • Ceresa, M.
  • Muñoz Barrutia, Maria Arrate
  • Ortiz De Solórzano, Carlos

Lung Imaging and Computer Aided Diagnosis (p. 137-150) - 4/2016

Editor: CRC PRESS

  • ISBN 978-1-4398-4558-5
Open Access

NANOTECH START'22

  • Muñoz Barrutia, Maria Arrate

Jornada de Innovación Docente 2022 - 2022

Open Access

Search for temporal cell segmentation robustness in phase-contrast microscopy videos

  • Gomez De Mariscal, Estibaliz
  • Jayatilaka, Hasini
  • Çiçek, Özgün
  • Brox, Thomas
  • Wirtz, Denis
  • Muñoz Barrutia, Maria Arrate

Medical Imaging with Deep Learning (MIDL 2022) (p. 1-3) - 2022

Tuberculosis Lesions in CT Images Inferred using 3D-CNN and Multi-Task Learning

  • Macias Gordaliza, Pedro
  • Vaquero Lopez, Juan Jose
  • Sharpe, Sally
  • Gleeson, F.
  • Muñoz Barrutia, Maria Arrate

16th IEEE International Symposium on Biomedical Imaging, ISBI 2019 (p. 294-297) - 2019

Editor: IEEE.THE INSTITUTE OF ELECTRICAL AND ELECTRONICS ENGINEERS, INC

https://doi.org/10.1109/isbi.2019.8759321 View at source

  • ISBN 19457928 (ISSN); 9781538636411 (ISBN)

TOWARDS AN INFORMATIONAL MODEL FOR TUBERCULOSIS LESIONDISCRIMINATION ON X-RAY CT IMAGES

  • Macias Gordaliza, Pedro
  • Vaquero Lopez, Juan Jose
  • Sharpe, Sally
  • Desco Menendez, Manuel
  • Muñoz Barrutia, Maria Arrate

ISBI' 18: IEEE international Symposium on Biomedical Imaging (p. 265-268) - 2018

Editor: IEEE Computer Society.

https://doi.org/10.1109/isbi.2018.8363570 View at source

  • ISBN 978-1-5386-3636-7
Open Access

Radiomics for the Discrimination of Tuberculosis Lesions

  • Macias Gordaliza, Pedro
  • Vaquero Lopez, Juan Jose
  • Sharpe, Sally
  • Desco Menendez, Manuel
  • Muñoz Barrutia, Maria Arrate

European Molecular Imaging Meeting (EMIM 2018) - 2018

Open Access

Spectral photon-counting CT of lungs of mice infected with Mycobacterium Tuberculosis: potential for locating Tuberculosis involvement

  • Ortega Gil, Ana
  • Moghiseh, M.
  • Lowe, C.
  • Muñoz Barrutia, Maria Arrate
  • Raja, A.
  • Butler, A.p.h.
  • Vaquero Lopez, Juan Jose
  • Anderson, N.g.
... View more Collapse

European Molecular Imaging Meeting (EMIM 2018) - 2018

Open Access

PDMS Microfluidic Chip for Multiplexed Testing of Antibiotics against Tuberculosis

  • Torres Simon, Amaro
  • Gonzalez Del Rio, R.
  • Muñoz Barrutia, Maria Arrate
  • Vaquero Lopez, Juan Jose

XXXVI Congreso Anual de la Sociedad Española de Ingeniería Biomédica (CASEIB2018) (p. 279-282) - 2018

Editor: VISILAB

  • ISBN 978-84-09-06253-9

Tuberculosis Histopathology on X Ray CT

  • Ortega Gil, Ana
  • Muñoz Barrutia, Maria Arrate
  • Fernandez Terron, Laura
  • Vaquero Lopez, Juan Jose

3rd International Workshop on Reconstruction and Analysis of Moving Body Organs, RAMBO 2018, 4th International Workshop on Breast Image Analysis, BIA 2018, and 1st International Workshop on Thoracic Image Analysis, TIA 2018, held in conjunction with 21st International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2018 (p. 169-179) - 2018

Editor: SPRINGER NATURE LIMITED

https://doi.org/10.1007/978-3-030-00946-5_18 View at source

  • ISBN 978-3-030-00945-8

Automatic Segmentation of Cell Protrusions in Low Magnification Phase Contrast Microscopy Videos

  • Gomez De Mariscal, Estibaliz
  • Jayatilaka, Hasini
  • Kim, Hyun Ji
  • Tyle, Pranay
  • Matsuda, Max
  • Wirtz, Denis
  • Muñoz Barrutia, Maria Arrate
... View more Collapse

IEEE International Symposium on Biomedical Imaging (ISBI 2018) - 2018

Open Access

Deep Learning Applications to BioImage Analysis

  • Gomez De Mariscal, Estibaliz
  • Muñoz Barrutia, Maria Arrate

SPAOM 2018: 2nd Spanish Portuguese Meeting for Advanced Optical Microscopy: 4th REMOA Conference (p. 108-108) - 2018

This researcher has no working papers.

This researcher has no technical reports.

947723 - 4D-BIOMAP: Biomechanical Stimulation based on 4D Printed Magneto-Active Polymers

  • Garcia Gonzalez, Daniel
  • Velasco Bayon, Diego
  • Muñoz Barrutia, Maria Arrate
  • Garzon Hernandez, Sara
  • Moreno Mateos, Miguel Angel
  • Gomez Cruz, Clara
  • Perez Garcia, Carlos
  • Gonzalez-rico Iriarte, Jorge
  • Lucarini San José, Sergio
  • Lopez Donaire, Maria Luisa
  • Fernandez De La Torre, Miguel
  • Lachowski, Dariusz
  • Rio Hernandez, Armando Emeterio Del
... View more Collapse

Period: 01-01-2021 - 31-12-2025

Type of funding: European

Funding entity: EUROPEAN COMMISSION RESEARCH EXECUTIVE AGENCY

AC20/00102 - Tratamiento personalizado en radioterapia mediante modelado integrado de nuevas restricciones y efectos dosimétricos locales - AC20/00102

  • Pascau Gonzalez Garzon, Javier
  • Muñoz Barrutia, Maria Arrate

Period: 01-01-2021 - 31-12-2024

Type of funding: National

Funding entity: INSTITUTO DE SALUD CARLOS III

101057970; 101057970 - AI4LIFE: Artificial Intelligence for Image Data Analysis in the Life Sciences

  • Muñoz Barrutia, Maria Arrate
  • Fuster Barcelo, Caterina
  • Estevez Albuja, Hector Ivan

Period: 22-12-2021 - 31-08-2025

Type of funding: European

Funding entity: EUROPEAN COMMISSION RESEARCH EXECUTIVE AGENCY

PID2019-109820RB-I00 - Plataforma de imagen multi-escala para acelerar el desarrollo de fármacos contra infecciones pulmonares

  • Vaquero Lopez, Juan Jose
  • Muñoz Barrutia, Maria Arrate
  • Chil Perez, Rigoberto
  • Lopez Exposito, Patricio Roberto

Period: 01-06-2020 - 29-02-2024

Type of funding: National

Funding entity: AGENCIA ESTATAL DE INVESTIGACION (AEI)

GA - 853989 - EUROPEAN REGIMEN ACCELERATOR FOR TUBERCULOSIS

  • Vaquero Lopez, Juan Jose
  • Calderon Mateos, Alejandro
  • Garcia Carballeira, Felix
  • Carretero Perez, Jesus
  • Exposito Singh, David
  • Toledo Heras, Maria Paula De
  • Garcia Blas, Francisco Javier
  • Pascau Gonzalez Garzon, Javier
  • Chil Perez, Rigoberto
  • Macias Gordaliza, Pedro
  • Muñoz Barrutia, Maria Arrate
  • Perez Benito, David
  • Sosa Sosa, Victor Jesus
  • Camarmas Alonso, Diego
  • Hidalgo Torres, Leandro Alexis
  • Brooks, Claire Jordan
  • Gomez Cruz, Clara
  • Esarte Araiz, Josu
  • Diaz De Liaño Lopez, Nuria
  • Lopez Exposito, Patricio Roberto
  • Reyes Perez, Eduardo Antonio
  • Ferrer Bazaga, Santiago
  • Visuña Perez, Lara
  • Mendoza Losana, Alfonso
  • Calle Muñoz, Melissa
  • Calvet Seral, Juan
  • Gutierrez De Pablo, Laura
... View more Collapse

Period: 01-01-2020 - 31-12-2025

Type of funding: European

Funding entity: EUROPEAN COMMISSION RESEARCH EXECUTIVE AGENCY

BIOMASKIN-CM-UM3M - Biocompatible Magneto-Active Structures to Simulate Skin Wound Healing: an Experimental-Computational Coupled Approach

  • Velasco Bayon, Diego
  • Garcia Gonzalez, Daniel
  • Arias Hernandez, Angel
  • Valencia Blanco, Leticia
  • Muñoz Barrutia, Maria Arrate
  • Garzon Hernandez, Sara
  • Tirado Garcia, Ignacio
  • Aranda Izuzquiza, Gonzalo De
... View more Collapse

Period: 01-01-2020 - 31-03-2022

Type of funding: Regional

Funding entity: CAM. CONSEJERÍA DE EDUCACIÓN E INVESTIGACION

RTC-2017-6600-1 - AAV para enfermedades genéticas renales

  • Muñoz Barrutia, Maria Arrate
  • Soto Montenegro, Mª Luisa

Period: 01-09-2018 - 30-04-2022

Type of funding: National

Funding entity: MINISTERIO DE CIENCIA E INNOVACION

GA- 801347; GA-801347 - SENSITIVE: Early Detection of cancer onset based on sensing field cancerization at the organ level (conv. H2020-FETOPEN-2016-2017 - Propuesta presentada en septiembre de 2017)

  • Ripoll Lorenzo, Jorge
  • Marcos Vidal, Asier
  • Muñoz Barrutia, Maria Arrate

Period: 01-11-2018 - 31-10-2022

Type of funding: European

Funding entity: EUROPEAN COMMISSION RESEARCH EXECUTIVE AGENCY

Sistema de imagen de tomografía de rayos X para ratones y chips PDMS de microfluídica para estudios de Time Lapse

  • Vaquero Lopez, Juan Jose
  • Ortega Gil, Ana
  • Marcos Vidal, Asier
  • Macias Gordaliza, Pedro
  • Muñoz Barrutia, Maria Arrate

Period: 22-02-2018 - 29-02-2020

Type of funding: Regional

Funding entity: GLAXOSMITHKLINE INVESTIGACION Y DESARROLLO, S.L. (GSK)

Plataforma computacional para la caracterización de la dinámica espacio-temporal de las protrusiones celulares

  • Muñoz Barrutia, Maria Arrate
  • Gomez De Mariscal, Estibaliz

Period: 15-09-2017 - 15-06-2019

Type of funding: National

Funding entity: FUNDACIÓN BBVA

Computer-Aided Assessment of Tuberculosis with Radiological Imaging: From rule-based methods to Deep Learning

  • Macias Gordaliza, Pedro
  • Muñoz Barrutia, Maria Arrate
  • Vaquero Lopez, Juan Jose

Reading date: 06-05-2022

Insights to the characterization of cell motility and intercellular communication through a bioimage analysis perspective

  • Gomez De Mariscal, Estibaliz
  • Muñoz Barrutia, Maria Arrate
  • Wirtz, Denis

Reading date: 28-09-2021

This researcher has no patents or software licenses.

Last data update: 2/7/24 8:38 AM