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Author profile at the institutional portal

Diaz Uriarte, Ramon r.diaz@uam.es

Bioquímica / Universidad Autónoma de Madrid

Publications

Global epistasis on fitness landscapes

  • Diaz-Colunga, J
  • Skwara, A
  • Gowda, K
  • Diaz-Uriarte, R
  • Tikhonov, M
  • Bajic, D
  • Sanchez, A
... View more Collapse

Philosophical Transactions Of The Royal Society B-Biological Sciences (p. 20220053-20220053) - 22/5/2023

10.1098/rstb.2022.0053

  • ISSN 09628436
  • iMarina

The long and winding road to understanding organismal construction: Reply to comments on 'From genotypes to organisms: State-of-the-art and perspectives of a cornerstone in evolutionary dynamics'

  • Manrubia, Susanna
  • Cuesta Ruiz, Jose Antonio
  • Aguirre, Jacobo
  • Ahnert, Sebastian E.
  • Altenberg, Lee
  • Cano, Alejandro V.
  • Catalan Fernandez, Pablo
  • Diaz Uriarte, Ramon
  • Elena, Santiago F.
  • Garcia Martin, Juan Antonio
  • Hogeweg, Paulien
  • Khatri, Bhavin S.
  • Krug, Joachim
  • Louis, Ard A.
  • Martin, Nora S.
  • Payne, Joshua L.
  • Tarnowski, Matthew J.
  • Weiß, Marcel
... View more Collapse

Physics of Life Reviews (p. 19-24) - 1/9/2022

https://doi.org/10.1016/j.plrev.2022.05.007 View at source

  • EISSN 1873-1457
  • ISSN 1571-0645

Ten quick tips for biomarker discovery and validation analyses using machine learning

  • Diaz-Uriarte R, Gómez de Lope E, Giugno R, Fröhlich H, Nazarov PV, Nepomuceno-Chamorro IA, Rauschenberger A, Glaab E

Plos Computational Biology (p. e1010357-e1010357) - 1/8/2022

10.1371/journal.pcbi.1010357

  • ISSN 1553734X
  • iMarina

EvAM-Tools: tools for evolutionary accumulation and cancer progression models

  • Diaz-Uriarte R, Herrera-Nieto P

Bioinformatics (p. 5457-5459) - 13/12/2022

Editor: NLM (Medline)

10.1093/bioinformatics/btac710 View at source

  • ISSN 13674803
  • ISSN/ISBN 1367-4811
Open Access

From genotypes to organisms: State-of-the-art and perspectives of a cornerstone in evolutionary dynamics

  • Manrubia, Susanna
  • Cuesta Ruiz, Jose Antonio
  • Aguirre, Jacobo
  • Ahnertgh, Sebastian E.
  • Altenberg, Lee
  • Cano, Alejandro V.
  • Catalan Fernandez, Pablo
  • Diaz-uriarte, Ramon
  • Elena, Santiago. F.
  • Garcia Martin, Juan Antonio
  • Hogewegs, Paulien
  • Khatri, Bhavin S.
  • Krug, Joachim
  • Louis, Ard A.
  • Martin, Nora S.
  • Payne, Joshua L.
  • Tarnowski, Matthew J.
  • Weiß, Marcel
... View more Collapse

Physics of Life Reviews (p. 55-106) - 1/9/2021

https://doi.org/10.1016/j.plrev.2021.03.004 View at source

  • EISSN 1873-1457
  • ISSN 1571-0645

Conditional prediction of consecutive tumor evolution using cancer progression models: What genotype comes next?

  • Diaz-Colunga, Juan
  • Diaz-Uriarte, Ramon;

Plos Computational Biology - 1/12/2021

10.1371/journal.pcbi.1009055 View at source

  • ISSN 1553734X

Every which way? On predicting tumor evolution using cancer progression models

  • Diaz-Uriarte, Ramon
  • Vasallo, Claudia

Plos Computational Biology - 1/1/2019

10.1371/journal.pcbi.1007246 View at source

  • ISSN 1553734X

Cancer progression models and fitness landscapes: A many-to-many relationship

  • Diaz-Uriarte R

Bioinformatics (p. 836-844) - 1/3/2018

10.1093/bioinformatics/btx663 View at source

  • ISSN 13674803

OncoSimulR: Genetic simulation with arbitrary epistasis and mutator genes in asexual populations

  • Diaz-Uriarte R

Bioinformatics (p. 1898-1899) - 15/6/2017

10.1093/bioinformatics/btx077 View at source

  • ISSN 13674803

Genome wide association study identifies a novel putative mammographic density locus at 1q12-q21

  • Fernandez-Navarro P., González-Neira A., Pita G., Díaz-Uriarte R., Tais Moreno L., Ederra M., Pedraz-Pingarrõn C., Sánchez-Contador C., Vázquez-Carrete J., Moreo P., Vidal C., Salas-Trejo D., Stone J., Southey M., Hopper J., Pérez-Gõmez B., Benitez J., Pollan M.

International Journal Of Cancer (p. 2427-2427) - 15/5/2015

10.1002/ijc.29299 View at source

  • ISSN 00207136

Effects of aggressive interactions on antipredator behavior: Empirical and theoretical aspects.

  • Ramón Diaz-Uriarte

1/1/2001

  • iMarina

Las aves urbanas

  • Díaz Uriarte, Ramón
  • Diez, Iñaki

1/1/1990

  • ISBN 84-86411-03-3
  • iMarina

Simulating Evolution in Asexual Populations with Epistasis

  • Diaz-Uriarte R

Methods In Molecular Biology (p. 121-154) - 1/1/2021

10.1007/978-1-0716-0947-7_9 View at source

  • ISSN 10643745

Supervised Methods with Genomic Data: A Review and Cautionary View

  • Diaz-Uriarte, Ramon;

9780470094396 (p. 193-214) - 15/6/2005

10.1002/0470094419.ch12 View at source

An applied statistician in microarray world: reviews and reflections

  • Díaz Uriarte, Ramón

X Conferencia Española De Biometría: (Libro De Resúmenes) (p. 9-9) - 1/1/2005

  • iMarina

Reconstructing Ancestral Trait Values Using Squared-Change Parsimony: Plasma Osmolarity at the Origin of Amniotes,

  • Diaz Uriarte, Ramon

Amniote Origins : Completing The Transition To Land (p. 425-501) - 1/1/1997

10.1016/b978-012676460-4/50014-7 View at source

Estimating the predictability of cancer evolution

  • Hosseini S
  • DIaz-Uriarte R
  • Markowetz F
  • Beerenwinkel N

Bioinformatics (p. i389-i397) - 15/7/2019

10.1093/bioinformatics/btz332 View at source

  • ISSN 13674803

ADaCGH2: parallelized analysis of (big) CNA

  • Diaz-Uriarte, Ramon;

Bioinformatics (p. 1759-1761) - 15/6/2014

10.1093/bioinformatics/btu099 View at source

  • ISSN 13674803

Using gene ontology on genome-scale studies to find significant associations of biologically relevant terms to groups of genes 2003

  • Fátima Al-Shahrour
  • Javier Herrero
  • A Mateos
  • Javier Santoyo
  • Ramón Díaz-Uriarte
  • Joaquín Dopazo

2003 Ieee Xiii Workshop On Neural Networks For Signal Processing - Nnsp'03 (p. 43-52) - 17/9/2003

10.1109/nnsp.2003.1318003 View at source

The use of go terms to understand the biological significance of microarray differential gene expression data

  • Diaz-Uriarte, R
  • Al-Shahrour, F
  • Dopazo, J;

Methods Of Microarray Data Analysis Iii (p. 233-247) - 1/1/2003

  • iMarina

This researcher has no working papers.

This researcher has no technical reports.

Terapia antitumoral adaptativa usando datos transversales y predicciones de modelos de progresión tumoral

  • Diaz Uriarte, Ramon (Investigador principal (IP))

Period: 01-06-2020 - 31-05-2024

Type of funding: National

Amount of funding: 71874,00 Euros.

  • iMarina

IDENTIFICACION DE RESTRICCIONES EN EL ORDEN DE ACUMULACION DE MUTACIONES DURANTE LA PROGRESION TUMORAL: METODOS DE INFERENCIA Y SOFTWARE DE SIMULACION

  • Diaz Uriarte, Ramon (Investigador principal (IP))

Period: 01-01-2016 - 31-12-2020

Type of funding: International

Amount of funding: 49610,00 Euros.

  • iMarina

Implementación de modelos computacionales masivamente paralelos.

  • Gonzalez Martinez, Ivan (Investigador principal (IP))
  • Corcoles Ortega, Juan (Miembro de equipo)

Period: 01-04-2013 - 30-09-2015

  • iMarina

Regiones recurrentes y paisajes genomicos y epigenéticos: Integración con árboles oncogenéticos.

  • Diaz Uriarte, Ramon (Investigador principal (IP))

Period: 01-01-2010 - 31-12-2013

  • iMarina

Desarrollo de métodos estadísticos para el análisis conjunto de arrays de CGH y arrays de expresión génica para el estudio de neoplasias humanas: Fundación Mutua Madrileña

  • Diaz Uriarte, Ramon (Investigador principal (IP))

Period: 01-01-2005 - 01-01-2008

  • iMarina

Extracción de conocimiento de los microarrays de ADN usando métodos estadísticos

  • Diaz Uriarte, Ramon (Investigador principal (IP))

Period: 01-01-2003 - 01-01-2006

  • iMarina

Control of developmental transitions by OCT4: a new role as a regulator of mTOR activity at gastrulation

  • Manzanares Fourcade, Miguel (Director)
  • Diaz Uriarte, Ramon (Tutor) Doctorando: Barral Gil, Antonio

2/6/2023

  • iMarina

Predicción de la funcionalidad de proteínas producidas por Splicing Alternativo

  • Liam Tress, Michael (Director)
  • Diaz Uriarte, Ramon (Tutor) Doctorando: Pozo Ocampo, Fernando

20/4/2023

  • iMarina

Developing drug prioritization approaches to target cancer genomes for precisión medicine

  • Al-Shahrour Núñez, Fátima (Director)
  • Diaz Uriarte, Ramon (Tutor) Doctorando: Piñeiro Yáñez, Elena

28/4/2021

  • iMarina

Analysis of the impact of population copy number variation in introns

  • Valencia Herrera, Alfonso (Director)
  • Rico Rodríguez, Daniel (Director)
  • Diaz Uriarte, Ramon (Tutor) Doctorando: Rigau de Llobet, María

21/6/2019

  • iMarina

Modelización computacional de las alteraciones metabólicas en cáncer de mama

  • Diaz Uriarte, Ramon (Director)
  • Gámez Pozo, Angelo (Director) Doctorando: Trilla Fuertes, Lucía

28/3/2019

  • iMarina

Computational approaches for the identification of putative therapeutic targets for pancreatic ductal adenocarcinoma

  • Al-Shahrour Núñez, Fátima (Director)
  • Valencia Herrera, Alfonso (Director)
  • Diaz Uriarte, Ramon (Tutor)

13/12/2019

  • iMarina

Desarrollo del algoritmo CAPRI para la estimación de la abundancia de complejos enzimáticos y su aplicación en la modelización del metabolismo en cáncer de mama

  • Espinosa Arranz, Enrique (Autor o Coautor)
  • Diaz Uriarte, Ramon (Autor o Coautor)
  • Juan Ángel Fresno Vara (Director)
  • Angelo Gamez Pozo (Director)
  • Gamez Pozo, Angelo (Autor o Coautor) Doctorando: Mariana Díaz Almirón

(p. 1-166) - 1/1/2018

Reading institution: Universidad Autónoma de Madrid

Análisis transcripcional de xenoinjertos derivados de pacientes con cáncer de páncreas

  • Diaz Uriarte, Ramon (Autor o Coautor)
  • Hidalgo Medina, Manuel (Director)

1/1/2014

  • iMarina

Statistical methods for the analysis of copy number alterations in the genome

  • Diaz Uriarte, Ramon (Director) Doctorando: Rueda Palacio, Oscar Manuel

19/12/2008

  • iMarina

This researcher has no patents or software licenses.

Last data update: 8/28/24 9:40 AM