The data shown for the Universidad Carlos III de Madrid are partial, as they are intended to answer 2 questions:

  • Who is researching a specific topic?
  • What is an expert, group or particular department researching?

The search results will adhere to the following limits: active Researchers at Carlos III University of Madrid, Projects since 2006 and Publications, Theses, Patents and Software since 2008.

Muñoz Barrutia, Maria Arrate mamunozb@ing.uc3m.es

Publications

DeepImageJ: A user-friendly environment to run deep learning models in ImageJ

  • Gomez De Mariscal, Estibaliz
  • Garcia Lopez De Haro, Carlos Javier
  • Ouyang, Wei
  • Donati, Laurene
  • Lundberg, Emma
  • Unser, Michael
  • Muñoz Barrutia, Maria Arrate
  • Sage, Daniel
... View more Collapse

bioRxiv - 5/2021

https://doi.org/10.1101/799270 View at source

A radiological score for the assessment of tuberculosis progression: Validation in mouse models

  • Ortega Gil, Ana
  • Muñoz Barrutia, Maria Arrate
  • Roca, Jose Juan
  • Guijarro-lopez, Laura
  • Vaquero Lopez, Juan Jose

Tuberculosis - 3/2020

https://doi.org/10.1016/j.tube.2020.101918 View at source

  • EISSN 1873-281X
  • ISSN 1472-9792
Open Access

ABANICCO: A New Color Space for Multi-Label Pixel Classification and Color Analysis

  • Nicolas Saenz, Laura
  • Ledezma Espino, Agapito Ismael
  • Pascau Gonzalez Garzon, Javier
  • Muñoz Barrutia, Maria Arrate

Sensors (p. 1-23) - 3/2023

https://doi.org/10.3390/s23063338 View at source

  • EISSN 1424-8220
  • ISSN 1424-3210
Open Access

Development of an Inverted Epifluorescence Microscope for Long-Term Monitoring of Bacteria in Multiplexed Microfluidic Devices

  • Torres Simon, Amaro
  • Marino Miguelez, Maria Henar
  • Gomez Cruz, Clara
  • Cañadas Ortega, Marina
  • Marco Esteban, Miguel
  • Ripoll Lorenzo, Jorge
  • Vaquero Lopez, Juan Jose
  • Muñoz Barrutia, Maria Arrate
... View more Collapse

Sensors (p. 1-14) - 8/2020

https://doi.org/10.3390/s20154140 View at source

  • EISSN 1424-8220
  • ISSN 1424-3210
Open Access

X-ray-based virtual slicing of TB-infected lungs

  • Ortega Gil, Ana
  • Vaquero Lopez, Juan Jose
  • Gonzalez Arjona, Mario
  • Rullas, Joaquín
  • Muñoz Barrutia, Maria Arrate

Scientific Reports (p. 19404) - 12/2019

https://doi.org/10.1038/s41598-019-55986-y View at source

  • ISSN 2045-2322
Open Access

Use of the p-values as a size-dependent function to address practical differences when analyzing large datasets

  • Gomez De Mariscal, Estibaliz
  • Guerrero Lozano, Vanesa
  • Sneider, Alexandra
  • Jayatilaka, Hasini
  • Phillip, Jude M.
  • Wirtz, Denis
  • Muñoz Barrutia, Maria Arrate
... View more Collapse

Scientific Reports (p. 1-13) - 10/2021

https://doi.org/10.1038/s41598-021-00199-5 View at source

  • ISSN 2045-2322
Open Access

Predicting MHC I restricted T cell epitopes in mice with NAP-CNB, a novel online tool

  • Wert Carvajal, Carlos
  • Sánchez García, Rubén
  • Macías, José R.
  • Sanz Pamplona, Rebeca
  • Méndez Pérez, Almudena
  • Alemany, Ramon
  • Veiga, Esteban
  • Sorzano, Carlos Óscar S.
  • Muñoz Barrutia, Maria Arrate
... View more Collapse

Scientific Reports (p. 1-10) - 5/2021

10.1038/s41598-021-89927-5 View at source

  • ISSN 2045-2322
Open Access

Unsupervised CT lung image segmentation of a mycobacterium tuberculosis infection model

  • Macias Gordaliza, Pedro
  • Muñoz Barrutia, Maria Arrate
  • Abella Garcia, Monica
  • Desco Menendez, Manuel
  • Sharpe, Sally
  • Vaquero Lopez, Juan Jose

Scientific Reports (p. 1-10) - 6/2018

https://doi.org/10.1038/s41598-018-28100-x View at source

  • ISSN 2045-2322
Open Access

Deep-learning-based segmentation of small extracellular vesicles in transmission electron microscopy images

  • Gomez De Mariscal, Estibaliz
  • Maška, Martin
  • Kotrbová, Anna
  • Pospíchalová, Vendula
  • Matula, Pavel
  • Muñoz Barrutia, Maria Arrate

Scientific Reports (p. 1-10) - 9/2019

https://doi.org/10.1038/s41598-019-49431-3 View at source

  • ISSN 2045-2322
Open Access

Innovations in ex vivo Light Sheet Fluorescence Microscopy

  • Delgado Rodriguez, Pablo
  • Brooks, Claire Jordan
  • Vaquero Lopez, Juan Jose
  • Muñoz Barrutia, Maria Arrate

PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY (p. 37-51) - 1/2022

https://doi.org/10.1016/j.pbiomolbio.2021.07.002 View at source

  • EISSN 1873-1732
  • ISSN 0079-6107

This researcher has no books.

Open Access

Acquisition and Automated Analysis of Normal and Pathological Lungs in Small Animals Using Microcomputed Tomography. In: Lung Imaging and Computer Aided Diagnosis

  • Artaechevarria, X.
  • Ceresa, M.
  • Muñoz Barrutia, Maria Arrate
  • Ortiz De Solórzano, Carlos

Lung Imaging and Computer Aided Diagnosis (p. 137-150) - 4/2016

Editor: CRC PRESS

  • ISBN 978-1-4398-4558-5

Emerging technologies and outlook. In: ImagingModalitiesforBiological andPreclinicalResearch: ACompendium,Volume2 Parts II&-IV: In vivo preclinical imaging, multimodality imaging and outlook

  • Walter, Andreas
  • Muñoz Barrutia, Maria Arrate
  • Jones, Martin
  • Mannheim, Julia G
  • Collinson, Lucy
  • Andreana, Marco
  • Unterhuber, Angelika
  • Verkade, Paul
... View more Collapse

ImagingModalitiesforBiological andPreclinicalResearch: ACompendium,Volume2 Parts II&-IV: In vivo preclinical imaging, multimodality imaging and outlook (p. V.1-1-IV.1-14) - 5/2021

Editor: IOP PUBLISHING LTD

https://doi.org/10.1088/978-0-7503-3747-2ch31 View at source

  • ISBN 978-0-7503-3747-2
Open Access

Building a bioimage analysis workflow using deep learning. In: Bioimage data analysis workflows ¿ Advanced components and methods

  • Gomez De Mariscal, Estibaliz
  • Franco Barranco, Daniel
  • Muñoz Barrutia, Maria Arrate
  • Arganda Carreras, Ignacio

Bioimage data analysis workflows ¿ Advanced components and methods (p. 61-87) - 9/2022

Editor: Springer Berlin / Heidelberg

https://doi.org/10.1007/978-3-030-76394-7_4 View at source

  • ISBN 978-3-030-76394-7
Open Access

PDMS Microfluidic Chip for Multiplexed Testing of Antibiotics against Tuberculosis

  • Torres Simon, Amaro
  • Gonzalez Del Rio, R.
  • Muñoz Barrutia, Maria Arrate
  • Vaquero Lopez, Juan Jose

XXXVI Congreso Anual de la Sociedad Española de Ingeniería Biomédica (CASEIB2018) (p. 279-282) - 2018

Editor: VISILAB

  • ISBN 978-84-09-06253-9

PET Texture Analysis: Does it Have Clinical Significance in Locally Advanced Rectal Cancer?

  • Martín González, Paula
  • Gomez De Mariscal, Estibaliz
  • Martino, Elena
  • Macias Gordaliza, Pedro
  • Carreras Delgado, J. L.
  • Calvo, Felipe
  • Pascau Gonzalez Garzon, Javier
  • Desco Menendez, Manuel
  • Muñoz Barrutia, Maria Arrate
... View more Collapse

XXXV Congreso Anual de la Sociedad Española de Ingeniería Biomédica (CASEIB 2017) (p. 403-406) - 2017

Accurate Lung Segmentation of Thorax CT Images on a Tuberculosis Infection Model

  • Zufiria, Blanca
  • Fernandez Terron, Laura
  • Macias Gordaliza, Pedro
  • Sharpe, Sally
  • Desco Menendez, Manuel
  • Muñoz Barrutia, Maria Arrate
  • Vaquero Lopez, Juan Jose
... View more Collapse

XXXV Congreso Anual de la Sociedad Española de Ingeniería Biomédica (CASEIB 2017) (p. 251-254) - 2017

Characterization of 3D network geometry in collagen hydrogels

  • Gonzalez Arjona, Mario
  • Vidal García, A.
  • Lajanillos Majón, J.
  • Muñoz Barrutia, Maria Arrate

V CNIC Conference “Mechanical Forces in Physiology and Disease - 2016

Atlas-based segmentation of brainstem regions in neuromelanin-sensitive magnetic resonance images

  • Puigvert, M.
  • Castellanos, G.
  • Uranga, J.
  • Abad, R.
  • Fernandez-seara, M.a.
  • Pastor, P.
  • Pastor, M.a.
  • Muñoz Barrutia, Maria Arrate
  • Ortiz De Solórzano, Carlos
... View more Collapse

SPIE Medical Imaging, 2015 - 2015

Editor: SPIE- THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING

https://doi.org/10.1117/12.2080779 View at source

  • ISBN 9781628415049

Quantification of pulmonary vessel diameter in low-dose CT images

  • Rudyanto, R.d.
  • Ortiz De Solórzano, Carlos
  • Muñoz Barrutia, Maria Arrate

SPIE Medical Imaging 2015 (p. 118) - 2015

Editor: SPIE- THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING

https://doi.org/10.1117/12.2081602 View at source

  • ISBN 9781628415049
Open Access

What Have We Learned from the Cell Tracking Challenge

  • Ulman, V.
  • Maska, Martin
  • Tomancak, P.
  • Meijering, E.
  • Muñoz Barrutia, Maria Arrate
  • Kozubek, Michal
  • Ortiz De Solórzano, Carlos
... View more Collapse

SPAOM 2018: 2nd Spanish Portuguese Meeting for Advanced Optical Microscopy: 4th REMOA Conference (p. 103-103) - 2018

Open Access

Deep Learning Applications to BioImage Analysis

  • Gomez De Mariscal, Estibaliz
  • Muñoz Barrutia, Maria Arrate

SPAOM 2018: 2nd Spanish Portuguese Meeting for Advanced Optical Microscopy: 4th REMOA Conference (p. 108-108) - 2018

Open Access

Search for temporal cell segmentation robustness in phase-contrast microscopy videos

  • Gomez De Mariscal, Estibaliz
  • Jayatilaka, Hasini
  • Çiçek, Özgün
  • Brox, Thomas
  • Wirtz, Denis
  • Muñoz Barrutia, Maria Arrate

Medical Imaging with Deep Learning (MIDL 2022) (p. 1-3) - 2022

Detecting airway remodeling in COPD and emphysema using low-dose CT imaging

  • Rudyanto, R.
  • Ceresa, M.
  • Muñoz Barrutia, Maria Arrate
  • Ortiz De Solórzano, Carlos

Medical Imaging 2012: Computer-Aided Diagnosis - 2012

Editor: The International Society for Optical (SPIE)

https://doi.org/10.1117/12.910901 View at source

  • ISBN 9780819489647

This researcher has no working papers.

This researcher has no technical reports.

Plataforma computacional para la caracterización de la dinámica espacio-temporal de las protrusiones celulares

  • Muñoz Barrutia, Maria Arrate
  • Gomez De Mariscal, Estibaliz

Period: 15-09-2017 - 15-06-2019

Type of funding: National

Funding entity: FUNDACIÓN BBVA

RTC-2017-6600-1 - AAV para enfermedades genéticas renales

  • Muñoz Barrutia, Maria Arrate
  • Soto Montenegro, Mª Luisa

Period: 01-09-2018 - 30-04-2022

Type of funding: National

Funding entity: MINISTERIO DE CIENCIA E INNOVACION

TEC2013-48552-C2-1-R - Caracterización por imagen de la mécanica de células tumorales

  • Muñoz Barrutia, Maria Arrate

Period: 01-10-2014 - 30-06-2018

Type of funding: National

Funding entity: MINISTERIO DE ECONOMÍA, COMERCIO Y EMPRESA

101057970; 101057970 - AI4LIFE: Artificial Intelligence for Image Data Analysis in the Life Sciences

  • Muñoz Barrutia, Maria Arrate
  • Fuster Barcelo, Caterina
  • Estevez Albuja, Hector Ivan

Period: 22-12-2021 - 31-08-2025

Type of funding: European

Funding entity: EUROPEAN COMMISSION RESEARCH EXECUTIVE AGENCY

TEC2015-73064-EXP - Descifrando la estructura y la función de las protusiones celulares en la migración tridimensional

  • Muñoz Barrutia, Maria Arrate

Period: 01-05-2017 - 30-04-2019

Type of funding: National

Funding entity: MINISTERIO DE ECONOMÍA, COMERCIO Y EMPRESA

GA-269300 - TAHITI: Improving Therapy and intervention through imaging

  • Pascau Gonzalez Garzon, Javier
  • Marinetto Carrillo, Eugenio Daniel
  • Muñoz Barrutia, Maria Arrate

Period: 17-12-2014 - 15-04-2016

Type of funding: European

Funding entity: EUROPEAN COMMISSION RESEARCH EXECUTIVE AGENCY

Computer-Aided Assessment of Tuberculosis with Radiological Imaging: From rule-based methods to Deep Learning

  • Macias Gordaliza, Pedro
  • Muñoz Barrutia, Maria Arrate
  • Vaquero Lopez, Juan Jose

Reading date: 06-05-2022

Insights to the characterization of cell motility and intercellular communication through a bioimage analysis perspective

  • Gomez De Mariscal, Estibaliz
  • Muñoz Barrutia, Maria Arrate
  • Wirtz, Denis

Reading date: 28-09-2021

This researcher has no patents or software licenses.

Last data update: 2/7/24 8:38 AM