Marabini Ruiz, Roberto roberto.marabini@uam.es

Actividades

Maximum-likelihood multi-reference refinement for electron microscopy images

  • Marabini Ruiz, Roberto
  • Scheres, Sjors H W
  • Valle, Mikel
  • Nunez, Rafael
  • Sorzano, Carlos O S
  • Herman, Gabor T
  • Carazo, Jose-Maria
... Ver más Contraer

Journal Of Molecular Biology (p. 139-149) - 22/4/2005

10.1016/j.jmb.2005.02.031 Ver en origen

  • ISSN 00222836

Map challenge: Analysis using a pair comparison method based on Fourier shell correlation

  • Marabini R
  • Kazemi M
  • Sorzano C
  • Carazo J

Journal Of Structural Biology (p. 527-542) - 1/12/2018

10.1016/j.jsb.2018.09.009 Ver en origen

  • ISSN 10478477

MRC2014: Extensions to the MRC format header for electron cryo-microscopy and tomography

  • Cheng A
  • Henderson R
  • Mastronarde D
  • Ludtke S
  • Schoenmakers R
  • Short J
  • Marabini R
  • Dallakyan S
  • Agard D
  • Winn M
... Ver más Contraer

Journal Of Structural Biology (p. 146-150) - 1/11/2015

10.1016/j.jsb.2015.04.002 Ver en origen

  • ISSN 10478477

Localization of the N-Terminus of Minor Coat Protein IIIa in the Adenovirus Capsid

  • San Martín C, Glasgow JN, Borovjagin A, Beatty MS, Kashentseva EA, Curiel DT, Marabini R, Dmitriev IP

Journal Of Molecular Biology (p. 923-934) - 21/11/2008

10.1016/j.jmb.2008.08.054 Ver en origen

  • ISSN 00222836

Local analysis of strains and rotations for macromolecular electron microscopy maps

  • Sorzano, C. O. S.
  • Martin-Ramos, A.
  • Prieto, F.
  • Melero, R.
  • Martin-Benito, J.
  • Jonic, S.
  • Navas-Calvente, J.
  • Vargas, J.
  • Oton, J.
  • Abrishami, V.
  • de la Rosa-Trevin, J. M.
  • Gomez-Blanco, J.
  • Vilas, J. L.
  • Marabini, R.
  • Carazo, J. M.;
... Ver más Contraer

JOURNAL OF STRUCTURAL BIOLOGY (p. 123-8) - 1/1/2016

10.1016/j.jsb.2016.04.001 Ver en origen

  • ISSN 10478477

Integration of Cryo-EM Model Building Software in Scipion

  • Martínez M
  • Jiménez-Moreno A
  • Maluenda D
  • Ramírez-Aportela E
  • Melero R
  • Cuervo A
  • Conesa P
  • Del Caño L
  • Fonseca YC
  • Sánchez-García R
  • Strelak D
  • Conesa JJ
  • Fernández-Giménez E
  • de Isidro F
  • Sorzano COS
  • Carazo JM
  • Marabini R
... Ver más Contraer

Journal Of Chemical Information And Modeling (p. 2533-2540) - 26/5/2020

10.1021/acs.jcim.9b01032 Ver en origen

  • ISSN 15499596

Image processing tools for the validation of CryoEM maps (vol 240, pg 210, 2022)

  • Sorzano, C. O. S.
  • Vilas, J. L.
  • Ramirez-Aportela, E.
  • Krieger, J.
  • del Hoyo, D.
  • Herreros, D.
  • Fernandez-Gimenez, E.
  • Marchan, D.
  • Gomez, F. de Isidro
  • Macias, J. R.
  • Sanchez, I
  • del Cano, L.
  • Fonseca-Reyna, Y.
  • Conesa, P.
  • Garcia-Mena, A.
  • Burguet, J.
  • Condado, J. Garcia
  • Garcia, J. Mendez
  • Martinez, M.
  • Munoz-Barrutia, A.
  • Marabini, R.
  • Vargas, J.
  • Carazo, J. M.;
... Ver más Contraer

Faraday Discussions (p. 228-228) - 11/11/2022

10.1039/d2fd90074b Ver en origen

  • ISSN 03017249
Open Access

Image processing tools for the validation of CryoEM maps

  • Sorzano, C. O. S.
  • Vilas, J. L.
  • Ramirez-Aportela, E.
  • Krieger, J.
  • del Hoyo, D.
  • Herreros, D.
  • Fernandez-Gimenez, E.
  • Marchan, D.
  • Macias, J. R.
  • Sanchez, I
  • del Cano, L.
  • Fonseca-Reyna, Y.
  • Conesa, P.
  • Garcia-Mena, A.
  • Burguet, J.
  • Garcia Condado, J.
  • Mendez Garcia, J.
  • Martinez, M.
  • Munoz-Barrutia, A.
  • Marabini, R.
  • Vargas, J.
  • Carazo, J. M.;
... Ver más Contraer

Faraday Discussions (p. 210-227) - 4/4/2022

10.1039/d2fd00059h Ver en origen

  • ISSN 03017249

Image processing for electron microscopy single-particle analysis using XMIPP

  • Scheres S
  • Núñez-Ramírez R
  • Sorzano C
  • Carazo J
  • Marabini R

Nature Protocols (p. 977-990) - 1/5/2008

10.1038/nprot.2008.62 Ver en origen

  • ISSN 17542189

Image processing approaches to biological three-dimensional electron microscopy

  • Herman GT
  • Marabini R
  • Carazo JM
  • Garduño E
  • Lewitt RM
  • Matej S

International Journal Of Imaging Systems And Technology (p. 12-29) - 1/1/2000

10.1002/(sici)1098-1098(2000)11:1<12::aid-ima3>3.0.co;2-n Ver en origen

  • ISSN 08999457

Este/a investigador/a no tiene libros.

Soft X-ray tomography imaging for biological samples

  • Otón J
  • Sorzano COS
  • Chichón FJ
  • Carrascosa JL
  • Carazo JM
  • Marabini R

Applied And Numerical Harmonic Analysis (p. 187-220) - 1/1/2014

10.1007/978-1-4614-9521-5_8 Ver en origen

  • ISSN 22965009

Pattern recognition and classification of images of biological macromolecules using neural networks

  • MARABINI, R
  • CARAZO, JM;

Electron Microscopy 1994, Vol 1: Interdisciplinary Developments And Tools (p. 501-502) - 1/1/1994

  • iMarina

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano COS
  • Marabini R
  • Vargas J
  • Otón J
  • Cuenca-Alba J
  • Quintana A
  • de la Rosa-Trevín JM
  • Carazo JM
... Ver más Contraer

Applied And Numerical Harmonic Analysis (p. 7-42) - 1/1/2014

10.1007/978-1-4614-9521-5_2 Ver en origen

  • ISSN 22965009

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano COS
  • Jiménez-Moreno A
  • Maluenda D
  • Ramírez-Aportela E
  • Martínez M
  • Cuervo A
  • Melero R
  • Conesa JJ
  • Sánchez-García R
  • Strelak D
  • Filipovic J
  • Fernández-Giménez E
  • de Isidro-Gómez F
  • Herreros D
  • Conesa P
  • del Caño L
  • Fonseca Y
  • de la Morena JJ
  • Macías JR
  • Losana P
  • Marabini R
  • Carazo JM
... Ver más Contraer

Methods In Molecular Biology (p. 257-289) - 1/1/2021

10.1007/978-1-0716-1406-8_13 Ver en origen

  • ISSN 10643745

Grid computing in structure determination of biological specimens by electron microscope tomography

  • Fernández JJ
  • Bilbao-Castro JR
  • Marabini R
  • Carazo JM
  • García I

Lecture Notes In Computer Science (p. 171-181) - 1/1/2004

10.1007/978-3-540-24689-3_22 Ver en origen

  • ISBN 9783540210481
  • ISSN 03029743

Discrete Tomography in Electron Microscopy

  • Carazo, JM
  • Sorzano COS
  • Rietzel, E
  • Schroder, R
  • Marabini Ruiz, Roberto

Discrete Tomography: Foundations, Algorithms, And Applications (p. 405-416) - 1/1/1999

10.1007/978-1-4612-1568-4_18 Ver en origen

Consistent and elastic registration of histological sections using vector-spline regularization

  • Arganda-Carreras I
  • Sorzano COS
  • Marabini R
  • Carazo JM
  • Ortiz-De-Solorzano C
  • Kybic J

Lecture Notes In Computer Science (p. 85-95) - 1/1/2006

10.1007/11889762_8 Ver en origen

  • ISBN 9783540462576
  • ISSN 03029743

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J
  • Herman G
  • Sorzano C
  • Marabini R

Electron Tomography: Methods For Three-Dimensional Visualization Of Structures In The Cell (p. 217-243) - 1/1/2006

10.1007/978-0-387-69008-7_8 Ver en origen

A GA-optimized neural network for classification of biological particles from electron-microscopy images

  • Marabini Ruiz, Roberto

Biological And Artificial Computation: From Neuroscience To Technology: International Work-Conference On Artificial And Natural Neural Networks, Iwann'97 (p. 1174-1182) - 1/1/1997

10.1007/bfb0032577 Ver en origen

Zero-loss P-contrast in EFTEM

  • Rietzel, E
  • Schorsch, P
  • Muller, H
  • Marabini, R
  • Sorzano, C
  • Carazo, JM
  • Schimpf, U
  • Leue, C
  • Holmes, KC
  • Schroder, RR;
... Ver más Contraer

Electron Microscopy 1998, Vol 4: Biological Sciences (p. 421-422) - 1/1/1998

  • iMarina

Volumetric constraints in 3D tomography applied to electron microscopy

  • Marabini R
  • Herman G
  • Sorzano C
  • Carazo J

Proceedings (International Symposium On Biomedical Imaging) (p. 641-644) - 1/1/2002

10.1109/isbi.2002.1029339 Ver en origen

  • ISBN 0-7803-7584-X
  • ISSN 19457928

Towards a data-bank of three-dimensional macromolecular structures: A WWW-based prototype

  • Marabini Ruiz, Roberto

Electron Microscopy 1994, Vol 1: Interdisciplinary Developments And Tools (p. 519-520) - 1/1/1994

  • iMarina

Three-dimensional reconstruction from reduced sets of very noisy images acquired following a single-axis tilt schema: Application of a new three- dimensional reconstruction algorithm and objective comparison with weighted backprojection

  • Marabini R
  • Rietzel E
  • Schroeder R
  • Herman G
  • Carazo J

Journal Of Structural Biology (p. 363-371) - 1/1/1997

10.1006/jsbi.1997.3923 Ver en origen

  • ISSN 10478477

The effect of overabundant projection directions on 3D reconstruction algorithms

  • Sorzano C
  • Marabini R
  • Boisset N
  • Rietzel E
  • Schröder R
  • Herman G
  • Carazo J
... Ver más Contraer

Journal Of Structural Biology (p. 108-118) - 1/1/2001

10.1006/jsbi.2001.4338 Ver en origen

  • ISSN 10478477

Study of the collars extracted from T3 and 029 viral particles

  • MARCO, S
  • VALPUESTA, JM
  • CARAZO, JM
  • MARABINI, R
  • FUJISAWA, H
  • CARRASCOSA, JL;

Electron Microscopy 1994, Vols 3a And 3b: Applications In Biological Sciences (p. 535-536) - 1/1/1994

  • iMarina

Outlier detection for single particle analysis in Electron Microscopy

  • Sorzano, C. O. S.
  • Vargas, J.
  • de la Rosa-Trevin, J. M.
  • Zaldivar-Peraza, A.
  • Oton, J.
  • Abrishami, V.
  • Foche, I.
  • Marabini, R.
  • Caffarena, G.
  • Carazo, J. M.;
... Ver más Contraer

Proceedings Iwbbio 2014: International Work-Conference On Bioinformatics And Biomedical Engineering (p. 950-959) - 1/1/2014

  • ISBN 9788415814849
  • iMarina

On a prototype for a new distributed data base of volume data obtained by 3D imaging

  • MARABINI, R
  • VAQUERIZO, C
  • FERNANDEZ, JJJ
  • CARAZO, JM
  • LADJADJ, M
  • ODESANYA, O
  • FRANK, J;
... Ver más Contraer

Proceedings Of Spie - The International Society For Optical Engineering (p. 466-472) - 9/9/1994

10.1117/12.185208 Ver en origen

  • ISSN 0277786X

Iterative reconstruction for pet scanners with continuous scintillators

  • Iriarte A
  • Caffarena G
  • Lopez-Fernandez M
  • Garcia-Carmona R
  • Otero A
  • Sorzano C
  • Marabini R
... Ver más Contraer

Conference Proceedings : ... Annual International Conference Of The Ieee Engineering In Medicine And Biology Society. Ieee Engineering In Medicine And Biology Society. Conference (p. 2259-2262) - 4/11/2015

10.1109/embc.2015.7318842 Ver en origen

  • ISBN 978-142449271-8
  • ISSN 1557170X

Image processing for Cellular tomography using soft X-rays

  • Sorzano
  • C O S Oton
  • J Cuenca
  • J Zaldivar-Perez
  • A Caffarena
  • G Sanchez-Jimenez
  • J Messaoudi
  • C Marco
  • S Marabini
  • R Carazo
  • J M
... Ver más Contraer

2012 9th Ieee International Symposium On Biomedical Imaging (Isbi) (p. 1322-1322) - 1/4/2012

10.1109/isbi.2012.6235808

  • ISBN 9781457718571
  • ISSN 9781457718588
  • iMarina

Este/a investigador/a no tiene documentos de trabajo.

Este/a investigador/a no tiene informes técnicos.

Reconstrucción tridimensional de vírus icosahedricos preservando sus características no icosahedricas.

  • Marabini Ruiz, Roberto (Investigador principal (IP))

Ejecución: 01-01-2010 - 31-12-2012

  • iMarina

Reconstrucción tridimensional de alta resolución en camaras pet de animales pequeños.

  • Iriarte Ruiz, Ana (Investigador/a)
  • SORZANO SANCHEZ, CARLOS OSCAR (Investigador/a)
  • Javier Velazquez Muriel (Investigador/a)
  • Monica Chagoyen Quiles (Investigador/a)
  • Carazo Garcia, Jose Maria S (Investigador/a)
  • Carlos Oscar Sanchez Sorzano (Investigador/a)
  • Marabini Ruiz, Roberto (Investigador principal (IP))
... Ver más Contraer

Ejecución: 01-01-2005 - 31-05-2008

  • iMarina

Hacia la proteomica visual: Herramientas para el cálculo y manejo de estructuras tridimensionales.

  • Ignacio Arganda Carreras (Investigador/a)
  • Ana Iriarte Ruiz (Investigador/a)
  • Simone Santini (Investigador/a)
  • Marabini Ruiz, Roberto (Investigador principal (IP))

Ejecución: 10-01-2007 - 04-04-2010

  • iMarina

Computación de altas prestaciones en tomografía

  • Marabini Ruiz, Roberto (Investigador principal (IP))

Ejecución: 01-01-2010 - 01-01-2013

  • iMarina

Scipion: a software framework toward integration, reproducibility and validation in 3D Electron Microscopy

  • Marabini Ruiz, Roberto (Autor o Coautor)
  • Roberto Marabini Ruiz (Director)
  • José María Carazo García (Director) Doctorando: Miguel de la Rosa

25/10/2017

  • iMarina

New computational methods toward atomic resolution in single particle cryo-electron microscopy

  • Marabini Ruiz, Roberto (Autor o Coautor)
  • José María Carazo García (Director)
  • Carlos Oscar Sanchez Sorzano (Director)
  • Roberto Marabini Ruiz (Director) Doctorando: Vahid Abrishami

22/6/2016

  • iMarina

High resolution three-dimensional reconstruction for small animal pet cameras

  • SORZANO SANCHEZ, CARLOS OSCAR (Director)
  • Marabini Ruiz, Roberto (Director) Doctorando: Iriarte Ruiz, Ana

19/7/2012

  • iMarina

Este/a investigador/a no tiene patentes o licencias de software.

Última actualización de los datos: 18/03/24 22:26