Marabini Ruiz, Roberto roberto.marabini@uam.es
Actividades
- Artículos 91
- Libros 0
- Capítulos de libro 9
- Congresos 15
- Documentos de trabajo 0
- Informes técnicos 0
- Proyectos de investigación 4
- Tesis dirigidas 3
- Patentes o licencias de software 0
Blind estimation of DED camera gain in Electron Microscopy
- Sorzano C
- Fernández-Giménez E
- Peredo-Robinson V
- Vargas J
- Majtner T
- Caffarena G
- Otón J
- Vilas J
- de la Rosa-Trevín J
- Melero R
- Gómez-Blanco J
- Cuenca J
- del Cano L
- Conesa P
- Marabini R
- Carazo J
Journal Of Structural Biology (p. 90-93) - 1/8/2018
10.1016/j.jsb.2018.03.007 Ver en origen
- ISSN 10478477
MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps
- Vilas J
- Gómez-Blanco J
- Conesa P
- Melero R
- Miguel de la Rosa-Trevín J
- Otón J
- Cuenca J
- Marabini R
- Carazo J
- Vargas J
- Sorzano C
Structure (p. 337-344.e4) - 6/2/2018
10.1016/j.str.2017.12.018 Ver en origen
- ISSN 09692126
Map challenge: Analysis using a pair comparison method based on Fourier shell correlation
- Marabini R
- Kazemi M
- Sorzano C
- Carazo J
Journal Of Structural Biology (p. 527-542) - 1/12/2018
10.1016/j.jsb.2018.09.009 Ver en origen
- ISSN 10478477
Using Scipion for stream image processing at Cryo-EM facilities
- Gómez-Blanco J
- de la Rosa-Trevín J
- Marabini R
- del Cano L
- Jiménez A
- Martínez M
- Melero R
- Majtner T
- Maluenda D
- Mota J
- Rancel Y
- Ramírez-Aportela E
- Vilas J
- Carroni M
- Fleischmann S
- Lindahl E
- Ashton A
- Basham M
- Clare D
- Savage K
- Siebert C
- Sharov G
- Sorzano C
- Conesa P
- Carazo J
Journal Of Structural Biology (p. 457-463) - 1/12/2018
10.1016/j.jsb.2018.10.001 Ver en origen
- ISSN 10478477
The first single particle analysis Map Challenge: A summary of the assessments
- Heymann JB
- Marabini R
- Kazemi M
- Sorzano COS
- Holmdahl M
- Mendez JH
- Stagg SM
- Jonic S
- Palovcak E
- Armache JP
- Zhao J
- Cheng Y
- Pintilie G
- Chiu W
- Patwardhan A
- Carazo JM
Journal Of Structural Biology (p. 291-300) - 1/11/2018
10.1016/j.jsb.2018.08.010 Ver en origen
- ISSN 10478477
A new algorithm for high-resolution reconstruction of single particles by electron microscopy
- Sorzano C., Vargas J., de la Rosa-Trevín J., Jiménez A., Maluenda D., Melero R., Martínez M., Ramírez-Aportela E., Conesa P., Vilas J., Marabini R., Carazo J.
Journal Of Structural Biology (p. 329-337) - 1/11/2018
10.1016/j.jsb.2018.08.002 Ver en origen
- ISSN 10478477
XTEND: Extending the depth of field in cryo soft X-ray tomography
- Otón J
- Pereiro E
- Conesa J
- Chichón F
- Luque D
- Rodríguez J
- Pérez-Berná A
- Sorzano C
- Klukowska J
- Herman G
- Vargas J
- Marabini R
- Carrascosa J
- Carazo J
Scientific Reports - 4/4/2017
10.1038/srep45808 Ver en origen
- ISSN 20452322
A review of resolution measures and related aspects in 3D Electron Microscopy
- Sorzano C
- Vargas J
- Otón J
- Abrishami V
- de la Rosa-Trevín J
- Gómez-Blanco J
- Vilas J
- Marabini R
- Carazo J
Progress In Biophysics & Molecular Biology (p. 1-30) - 1/3/2017
10.1016/j.pbiomolbio.2016.09.005 Ver en origen
- ISSN 00796107
ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds
- Cuenca-Alba J
- del Cano L
- Gómez Blanco J
- de la Rosa Trevín J
- Conesa Mingo P
- Marabini R
- Carlos C
- Carazo J
Journal Of Structural Biology (p. 20-27) - 1/10/2017
10.1016/j.jsb.2017.06.004 Ver en origen
- ISSN 10478477
A Survey of the Use of Iterative Reconstruction Algorithms in Electron Microscopy
- Sorzano C
- Vargas J
- Otón J
- De La Rosa-Trevín J
- Vilas J
- Kazemi M
- Melero R
- Del Caño L
- Cuenca J
- Conesa P
- Gómez-Blanco J
- Marabini R
- Carazo J
Biomed Research International - 1/1/2017
10.1155/2017/6482567 Ver en origen
- ISSN 23146133
Este/a investigador/a no tiene libros.
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano COS
- Jiménez-Moreno A
- Maluenda D
- Ramírez-Aportela E
- Martínez M
- Cuervo A
- Melero R
- Conesa JJ
- Sánchez-García R
- Strelak D
- Filipovic J
- Fernández-Giménez E
- de Isidro-Gómez F
- Herreros D
- Conesa P
- del Caño L
- Fonseca Y
- de la Morena JJ
- Macías JR
- Losana P
- Marabini R
- Carazo JM
Methods In Molecular Biology (p. 257-289) - 1/1/2021
10.1007/978-1-0716-1406-8_13 Ver en origen
- ISSN 10643745
Soft X-ray tomography imaging for biological samples
- Otón J
- Sorzano COS
- Chichón FJ
- Carrascosa JL
- Carazo JM
- Marabini R
Applied And Numerical Harmonic Analysis (p. 187-220) - 1/1/2014
10.1007/978-1-4614-9521-5_8 Ver en origen
- ISSN 22965009
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano COS
- Marabini R
- Vargas J
- Otón J
- Cuenca-Alba J
- Quintana A
- de la Rosa-Trevín JM
- Carazo JM
Applied And Numerical Harmonic Analysis (p. 7-42) - 1/1/2014
10.1007/978-1-4614-9521-5_2 Ver en origen
- ISSN 22965009
Consistent and elastic registration of histological sections using vector-spline regularization
- Arganda-Carreras I
- Sorzano COS
- Marabini R
- Carazo JM
- Ortiz-De-Solorzano C
- Kybic J
Lecture Notes In Computer Science (p. 85-95) - 1/1/2006
10.1007/11889762_8 Ver en origen
- ISBN 9783540462576
- ISSN 03029743
- iMarina
- iMarina
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J
- Herman G
- Sorzano C
- Marabini R
Electron Tomography: Methods For Three-Dimensional Visualization Of Structures In The Cell (p. 217-243) - 1/1/2006
Grid computing in structure determination of biological specimens by electron microscope tomography
- Fernández JJ
- Bilbao-Castro JR
- Marabini R
- Carazo JM
- García I
Lecture Notes In Computer Science (p. 171-181) - 1/1/2004
10.1007/978-3-540-24689-3_22 Ver en origen
- ISBN 9783540210481
- ISSN 03029743
- iMarina
- iMarina
Discrete Tomography in Electron Microscopy
- Carazo, JM
- Sorzano COS
- Rietzel, E
- Schroder, R
- Marabini Ruiz, Roberto
Discrete Tomography: Foundations, Algorithms, And Applications (p. 405-416) - 1/1/1999
A GA-optimized neural network for classification of biological particles from electron-microscopy images
- Marabini Ruiz, Roberto
Biological And Artificial Computation: From Neuroscience To Technology: International Work-Conference On Artificial And Natural Neural Networks, Iwann'97 (p. 1174-1182) - 1/1/1997
Pattern recognition and classification of images of biological macromolecules using neural networks
- MARABINI, R
- CARAZO, JM;
Electron Microscopy 1994, Vol 1: Interdisciplinary Developments And Tools (p. 501-502) - 1/1/1994
- iMarina
FSC-Q: A method for quality analysis of cryoEM-derived models
- Ramirez-Aportela, E
- Maluenda, D
- Fonseca, YC
- Conesa, P
- Marabini, R
- Sorzano, COS
- Carazo, JM
Acta Crystallographica A-Foundation And Advances (p. C56-C56) - 1/8/2021
- ISSN 20532733
- iMarina
Iterative reconstruction for pet scanners with continuous scintillators
- Iriarte A
- Caffarena G
- Lopez-Fernandez M
- Garcia-Carmona R
- Otero A
- Sorzano C
- Marabini R
Conference Proceedings : ... Annual International Conference Of The Ieee Engineering In Medicine And Biology Society. Ieee Engineering In Medicine And Biology Society. Conference (p. 2259-2262) - 4/11/2015
10.1109/embc.2015.7318842 Ver en origen
- ISBN 978-142449271-8
- ISSN 1557170X
An image processing approach to the simulation of electron microscopy volumes of atomic structures
- Sorzano C
- Vargas J
- Oton J
- Abrishami V
- De La Rosa-Trevin J
- Del Riego S
- Fernandez-Alderete A
- Martinez-Rey C
- Marabini R
- Carazo J
2014 Ieee International Conference On Image Processing, Icip 2014 (p. 2095-2099) - 28/1/2014
Outlier detection for single particle analysis in Electron Microscopy
- Sorzano, C. O. S.
- Vargas, J.
- de la Rosa-Trevin, J. M.
- Zaldivar-Peraza, A.
- Oton, J.
- Abrishami, V.
- Foche, I.
- Marabini, R.
- Caffarena, G.
- Carazo, J. M.;
Proceedings Iwbbio 2014: International Work-Conference On Bioinformatics And Biomedical Engineering (p. 950-959) - 1/1/2014
- ISBN 9788415814849
- iMarina
Image processing for Cellular tomography using soft X-rays
- Sorzano
- C O S Oton
- J Cuenca
- J Zaldivar-Perez
- A Caffarena
- G Sanchez-Jimenez
- J Messaoudi
- C Marco
- S Marabini
- R Carazo
- J M
2012 9th Ieee International Symposium On Biomedical Imaging (Isbi) (p. 1322-1322) - 1/4/2012
- ISBN 9781457718571
- ISSN 9781457718588
- iMarina
Effects of the Downsampling Scheme on Three-dimensional Electron Microscopy of Single Particles
- Sorzano C
- Iriarte A
- Marabini R
- Carazo J
Wisp 2009: 6th Ieee International Symposium On Intelligent Signal Processing, Proceedings (p. 175-179) - 10/12/2009
10.1109/wisp.2009.5286563 Ver en origen
- ISBN 978-1-4244-5059-6
Volumetric constraints in 3D tomography applied to electron microscopy
- Marabini R
- Herman G
- Sorzano C
- Carazo J
Proceedings (International Symposium On Biomedical Imaging) (p. 641-644) - 1/1/2002
10.1109/isbi.2002.1029339 Ver en origen
- ISBN 0-7803-7584-X
- ISSN 19457928
3D reconstruction of 2D crystals from projections in real space
- Marabini R
- Herman G
- Sorzano C
- Carazo J
- Fernandez J
- Matej S
Proceedings (International Symposium On Biomedical Imaging) (p. 689-692) - 1/1/2002
10.1109/isbi.2002.1029351 Ver en origen
- ISSN 19457928
The effect of overabundant projection directions on 3D reconstruction algorithms
Journal Of Structural Biology (p. 108-118) - 1/1/2001
10.1006/jsbi.2001.4338 Ver en origen
- ISSN 10478477
Este/a investigador/a no tiene documentos de trabajo.
Este/a investigador/a no tiene informes técnicos.
Reconstrucción tridimensional de vírus icosahedricos preservando sus características no icosahedricas.
- Marabini Ruiz, Roberto (Investigador principal (IP))
Ejecución: 01-01-2010 - 31-12-2012
- iMarina
Computación de altas prestaciones en tomografía
- Marabini Ruiz, Roberto (Investigador principal (IP))
Ejecución: 01-01-2010 - 01-01-2013
- iMarina
Hacia la proteomica visual: Herramientas para el cálculo y manejo de estructuras tridimensionales.
- Ignacio Arganda Carreras (Investigador/a)
- Ana Iriarte Ruiz (Investigador/a)
- Simone Santini (Investigador/a)
- Marabini Ruiz, Roberto (Investigador principal (IP))
Ejecución: 10-01-2007 - 04-04-2010
- iMarina
Reconstrucción tridimensional de alta resolución en camaras pet de animales pequeños.
- Iriarte Ruiz, Ana (Investigador/a)
- SORZANO SANCHEZ, CARLOS OSCAR (Investigador/a)
- Javier Velazquez Muriel (Investigador/a)
- Monica Chagoyen Quiles (Investigador/a)
- Carazo Garcia, Jose Maria S (Investigador/a)
- Carlos Oscar Sanchez Sorzano (Investigador/a)
- Marabini Ruiz, Roberto (Investigador principal (IP))
Ejecución: 01-01-2005 - 31-05-2008
- iMarina
Scipion: a software framework toward integration, reproducibility and validation in 3D Electron Microscopy
- Marabini Ruiz, Roberto (Autor o Coautor)
- Roberto Marabini Ruiz (Director)
- José María Carazo García (Director) Doctorando: Miguel de la Rosa
25/10/2017
- iMarina
New computational methods toward atomic resolution in single particle cryo-electron microscopy
- Marabini Ruiz, Roberto (Autor o Coautor)
- José María Carazo García (Director)
- Carlos Oscar Sanchez Sorzano (Director)
- Roberto Marabini Ruiz (Director) Doctorando: Vahid Abrishami
22/6/2016
- iMarina
Este/a investigador/a no tiene patentes o licencias de software.
Perfiles de investigador/a
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